Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 L1CAM-201ENST00000361699 3888 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 AC020658.7-201ENST00000624274 2442 ntBASIC10.1□□□□□ -0.79
SVIPQ8NHG7 LRRCC1-201ENST00000360375 3813 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 CD3E-201ENST00000361763 1548 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 STRIP1-201ENST00000369795 3265 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 CHID1-204ENST00000449825 3537 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 GMEB2-202ENST00000370069 4011 ntTSL 5 BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 AC104447.1-201ENST00000624214 2124 ntBASIC10.1□□□□□ -0.79
SVIPQ8NHG7 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 SPTBN2-211ENST00000617502 3498 ntTSL 5 BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 RHD-201ENST00000328664 2930 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
SVIPQ8NHG7 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 BX640514.1-201ENST00000583223 1918 ntBASIC10.09□□□□□ -0.79
SVIPQ8NHG7 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 DERL1-201ENST00000259512 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 PPT1-215ENST00000641471 2368 ntBASIC10.09□□□□□ -0.79
SVIPQ8NHG7 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 AC073335.2-201ENST00000610177 3441 ntBASIC10.09□□□□□ -0.79
SVIPQ8NHG7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 LINC00607-204ENST00000423530 2104 ntTSL 2 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 ZNF711-203ENST00000373165 4124 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 LINC00608-202ENST00000432733 2818 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 MEIS1-212ENST00000495021 2836 ntTSL 2 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 RASGRP4-218ENST00000617966 2927 ntTSL 5 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 HIST1H3E-202ENST00000634733 2679 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 RPL10-204ENST00000424325 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 AL805961.1-203ENST00000641078 1258 ntBASIC10.09□□□□□ -0.79
SVIPQ8NHG7 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 AC100788.2-201ENST00000625199 2889 ntBASIC10.09□□□□□ -0.79
SVIPQ8NHG7 AC022497.1-201ENST00000624916 3691 ntBASIC10.09□□□□□ -0.79
SVIPQ8NHG7 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 ZNF384-203ENST00000361959 2978 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 KXD1-217ENST00000602094 2738 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 STAT6-220ENST00000556155 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
SVIPQ8NHG7 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms