Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 BCRP1-201ENST00000444246 691 ntBASIC17.63■□□□□ 0.41
BEST2Q8NFU1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 AC011467.4-201ENST00000594891 528 ntBASIC17.63■□□□□ 0.41
BEST2Q8NFU1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 AC092171.3-201ENST00000610122 2651 ntBASIC17.63■□□□□ 0.41
BEST2Q8NFU1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.63■□□□□ 0.41
BEST2Q8NFU1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 FAM8A3P-201ENST00000427218 844 ntBASIC17.62■□□□□ 0.41
BEST2Q8NFU1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 DUX4L27-201ENST00000554796 1261 ntBASIC17.62■□□□□ 0.41
BEST2Q8NFU1 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
BEST2Q8NFU1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.61■□□□□ 0.41
BEST2Q8NFU1 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 AC140878.1-201ENST00000565277 250 ntBASIC17.61■□□□□ 0.41
BEST2Q8NFU1 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 AC007967.4-201ENST00000614700 386 ntBASIC17.61■□□□□ 0.41
BEST2Q8NFU1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BEST2Q8NFU1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms