Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.08■□□□□ 0.81
RTL9Q8NET4 AC140912.1-201ENST00000577171 1054 ntBASIC20.08■□□□□ 0.81
RTL9Q8NET4 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.08■□□□□ 0.81
RTL9Q8NET4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
RTL9Q8NET4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTL9Q8NET4 IGHV3-72-202ENST00000621503 303 ntBASIC20.08■□□□□ 0.81
RTL9Q8NET4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.08■□□□□ 0.81
RTL9Q8NET4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTL9Q8NET4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTL9Q8NET4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTL9Q8NET4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.08■□□□□ 0.81
RTL9Q8NET4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTL9Q8NET4 RNF216P1-203ENST00000404404 2427 ntBASIC20.08■□□□□ 0.81
RTL9Q8NET4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTL9Q8NET4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTL9Q8NET4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
RTL9Q8NET4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTL9Q8NET4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTL9Q8NET4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RTL9Q8NET4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RTL9Q8NET4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RTL9Q8NET4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.08■□□□□ 0.8
RTL9Q8NET4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.08■□□□□ 0.8
RTL9Q8NET4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTL9Q8NET4 AL391825.1-201ENST00000457671 1364 ntBASIC20.08■□□□□ 0.8
RTL9Q8NET4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
RTL9Q8NET4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTL9Q8NET4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTL9Q8NET4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RTL9Q8NET4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.08■□□□□ 0.8
RTL9Q8NET4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC20.08■□□□□ 0.8
RTL9Q8NET4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTL9Q8NET4 HIST3H2BA-201ENST00000436555 524 ntBASIC20.08■□□□□ 0.8
RTL9Q8NET4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.08■□□□□ 0.8
RTL9Q8NET4 AC093004.1-201ENST00000508850 424 ntBASIC20.08■□□□□ 0.8
RTL9Q8NET4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC20.08■□□□□ 0.8
RTL9Q8NET4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.08■□□□□ 0.8
RTL9Q8NET4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTL9Q8NET4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RTL9Q8NET4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.07■□□□□ 0.8
RTL9Q8NET4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTL9Q8NET4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTL9Q8NET4 CYP4F24P-201ENST00000586049 1580 ntBASIC20.07■□□□□ 0.8
RTL9Q8NET4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.07■□□□□ 0.8
RTL9Q8NET4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTL9Q8NET4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.07■□□□□ 0.8
RTL9Q8NET4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.07■□□□□ 0.8
RTL9Q8NET4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RTL9Q8NET4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC20.07■□□□□ 0.8
RTL9Q8NET4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTL9Q8NET4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTL9Q8NET4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTL9Q8NET4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTL9Q8NET4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC20.07■□□□□ 0.8
RTL9Q8NET4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.07■□□□□ 0.8
RTL9Q8NET4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.07■□□□□ 0.8
RTL9Q8NET4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTL9Q8NET4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTL9Q8NET4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
RTL9Q8NET4 GNAQP1-201ENST00000444815 1067 ntBASIC20.07■□□□□ 0.8
RTL9Q8NET4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC20.07■□□□□ 0.8
RTL9Q8NET4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC20.07■□□□□ 0.8
RTL9Q8NET4 SDHAP3-202ENST00000515467 728 ntBASIC20.07■□□□□ 0.8
RTL9Q8NET4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC20.07■□□□□ 0.8
RTL9Q8NET4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.07■□□□□ 0.8
RTL9Q8NET4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.07■□□□□ 0.8
RTL9Q8NET4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTL9Q8NET4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
RTL9Q8NET4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL9Q8NET4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RTL9Q8NET4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTL9Q8NET4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.06■□□□□ 0.8
RTL9Q8NET4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL9Q8NET4 AC138969.3-201ENST00000546612 1459 ntBASIC20.06■□□□□ 0.8
RTL9Q8NET4 AC138932.2-201ENST00000548268 1459 ntBASIC20.06■□□□□ 0.8
RTL9Q8NET4 AC126755.4-201ENST00000549796 1459 ntBASIC20.06■□□□□ 0.8
RTL9Q8NET4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTL9Q8NET4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.06■□□□□ 0.8
RTL9Q8NET4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RTL9Q8NET4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RTL9Q8NET4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL9Q8NET4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.06■□□□□ 0.8
RTL9Q8NET4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC20.06■□□□□ 0.8
RTL9Q8NET4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RTL9Q8NET4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
RTL9Q8NET4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RTL9Q8NET4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.06■□□□□ 0.8
RTL9Q8NET4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTL9Q8NET4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.06■□□□□ 0.8
RTL9Q8NET4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL9Q8NET4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.06■□□□□ 0.8
RTL9Q8NET4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RTL9Q8NET4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL9Q8NET4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL9Q8NET4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL9Q8NET4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL9Q8NET4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL9Q8NET4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.06■□□□□ 0.8
RTL9Q8NET4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RTL9Q8NET4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms