Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 AKAP8P1-201ENST00000434743 1349 ntBASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 DNAJB3-201ENST00000446806 729 ntBASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 AC092919.2-201ENST00000623631 1645 ntBASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 U82695.1-201ENST00000635752 1889 ntBASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.71■□□□□ 0.11
SRFBP1Q8NEF9 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SRFBP1Q8NEF9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SRFBP1Q8NEF9 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.71■□□□□ 0.1
SRFBP1Q8NEF9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SRFBP1Q8NEF9 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.71■□□□□ 0.1
SRFBP1Q8NEF9 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.71■□□□□ 0.1
SRFBP1Q8NEF9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
SRFBP1Q8NEF9 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.71■□□□□ 0.1
SRFBP1Q8NEF9 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 MKNK2P1-201ENST00000437526 628 ntBASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 RARRES2P8-201ENST00000566335 367 ntBASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 C20orf181-201ENST00000623918 480 ntBASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.7■□□□□ 0.1
SRFBP1Q8NEF9 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SRFBP1Q8NEF9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms