Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 HCG4B-203ENST00000450128 991 ntBASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 AL513480.1-201ENST00000451731 511 ntBASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 AC022188.1-201ENST00000620960 1664 ntBASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LSMEM1Q8N8F7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 RHOQP3-201ENST00000437982 621 ntBASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 AC079776.4-201ENST00000511039 504 ntBASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 RNA5SP415-201ENST00000517246 115 ntBASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 AC096734.2-201ENST00000562054 433 ntBASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 AL031055.1-201ENST00000606362 631 ntBASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 HLA-A-201ENST00000376802 1334 ntBASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LSMEM1Q8N8F7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms