Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC33Q8N5R6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 AC140658.5-201ENST00000438532 169 ntBASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 FAM86GP-201ENST00000448322 971 ntBASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 AL645728.2-201ENST00000641974 660 ntBASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC33Q8N5R6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 AC131009.4-201ENST00000624048 1740 ntBASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 AL592309.1-201ENST00000443127 649 ntBASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 AC005498.2-205ENST00000593218 784 ntBASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 AL096865.1-201ENST00000606796 927 ntBASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC33Q8N5R6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC33Q8N5R6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC33Q8N5R6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC33Q8N5R6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CCDC33Q8N5R6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.27■□□□□ 0.35
CCDC33Q8N5R6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC33Q8N5R6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC33Q8N5R6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.27■□□□□ 0.35
CCDC33Q8N5R6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.27■□□□□ 0.35
CCDC33Q8N5R6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC33Q8N5R6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC33Q8N5R6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CCDC33Q8N5R6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CCDC33Q8N5R6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CCDC33Q8N5R6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC33Q8N5R6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.27■□□□□ 0.35
CCDC33Q8N5R6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CCDC33Q8N5R6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms