Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 AC011495.1-201ENST00000498085 584 ntBASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 SDHAP3-202ENST00000515467 728 ntBASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 AC004461.2-201ENST00000629517 803 ntBASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 AC079776.1-201ENST00000401540 1152 ntBASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 AL162274.1-201ENST00000617191 1098 ntBASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NPAS3Q8IXF0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 TPRX2P-201ENST00000535362 881 ntBASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 AL109936.8-201ENST00000641772 604 ntBASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.9■□□□□ 0.3
NPAS3Q8IXF0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms