Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 AL160237.2-201ENST00000556165 472 ntBASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC83Q8IWF9 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 VN2R19P-201ENST00000442399 1052 ntBASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 FAAHP1-202ENST00000446499 1238 ntBASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 LINC00554-201ENST00000564841 3011 ntBASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC83Q8IWF9 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC83Q8IWF9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.33■□□□□ 0.69
CCDC83Q8IWF9 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC83Q8IWF9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CCDC83Q8IWF9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC83Q8IWF9 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC83Q8IWF9 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CCDC83Q8IWF9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC83Q8IWF9 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CCDC83Q8IWF9 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC83Q8IWF9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC83Q8IWF9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CCDC83Q8IWF9 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC83Q8IWF9 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC83Q8IWF9 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC83Q8IWF9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC83Q8IWF9 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC83Q8IWF9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 RNA5SP415-201ENST00000517246 115 ntBASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 CDC14C-201ENST00000428251 1719 ntBASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC83Q8IWF9 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC83Q8IWF9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms