Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 AC109635.5-201ENST00000533593 962 ntBASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 AC023141.13-201ENST00000604991 943 ntBASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 U82695.1-201ENST00000635752 1889 ntBASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 AC007950.2-201ENST00000615045 2347 ntBASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 AC008894.3-201ENST00000624324 3103 ntBASIC16.9■□□□□ 0.3
CDKL3Q8IVW4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDKL3Q8IVW4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
CDKL3Q8IVW4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDKL3Q8IVW4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDKL3Q8IVW4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 MIR648-201ENST00000385046 94 ntBASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 AL009183.1-201ENST00000603760 355 ntBASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms