Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 UNC93B2-201ENST00000285383 730 ntBASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 C2orf69P3-201ENST00000565542 1120 ntBASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CROCCP3Q8IVE0 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CROCCP3Q8IVE0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CROCCP3Q8IVE0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CROCCP3Q8IVE0 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
CROCCP3Q8IVE0 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CROCCP3Q8IVE0 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CROCCP3Q8IVE0 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 ABHD17AP1-201ENST00000358206 933 ntBASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 RPS2P55-201ENST00000397318 883 ntBASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 AC004263.2-201ENST00000617183 678 ntBASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CROCCP3Q8IVE0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 AC006504.5-208ENST00000588784 2401 ntBASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 AC034232.1-201ENST00000506026 1064 ntBASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CROCCP3Q8IVE0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms