Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 BX005266.1-201ENST00000473402 457 ntBASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 MIR5100-201ENST00000579544 119 ntBASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NUDCD3Q8IVD9 AC013268.4-201ENST00000637413 2228 ntBASIC16.39■□□□□ 0.22
NUDCD3Q8IVD9 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
NUDCD3Q8IVD9 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 PAWRP1-201ENST00000451083 565 ntBASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 AC091167.2-201ENST00000579581 588 ntBASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 RN7SL850P-201ENST00000579959 291 ntBASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 AC092329.2-201ENST00000598402 547 ntBASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 AC010654.1-201ENST00000615722 808 ntBASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUDCD3Q8IVD9 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 AC104819.1-201ENST00000504587 486 ntBASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 REXO1L3P-201ENST00000622202 1288 ntBASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NUDCD3Q8IVD9 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms