Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.46□□□□□ -0.25
VPS13CQ709C8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VPS13CQ709C8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VPS13CQ709C8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.46□□□□□ -0.25
VPS13CQ709C8 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
VPS13CQ709C8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VPS13CQ709C8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
VPS13CQ709C8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.46□□□□□ -0.26
VPS13CQ709C8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
VPS13CQ709C8 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.46□□□□□ -0.26
VPS13CQ709C8 CNN2P8-201ENST00000421872 913 ntBASIC13.46□□□□□ -0.26
VPS13CQ709C8 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
VPS13CQ709C8 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.46□□□□□ -0.26
VPS13CQ709C8 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.46□□□□□ -0.26
VPS13CQ709C8 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.46□□□□□ -0.26
VPS13CQ709C8 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.46□□□□□ -0.26
VPS13CQ709C8 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.46□□□□□ -0.26
VPS13CQ709C8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
VPS13CQ709C8 AL138688.1-201ENST00000624851 1594 ntBASIC13.45□□□□□ -0.26
VPS13CQ709C8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.45□□□□□ -0.26
VPS13CQ709C8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
VPS13CQ709C8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.45□□□□□ -0.26
VPS13CQ709C8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.45□□□□□ -0.26
VPS13CQ709C8 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
VPS13CQ709C8 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.45□□□□□ -0.26
VPS13CQ709C8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.45□□□□□ -0.26
VPS13CQ709C8 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.45□□□□□ -0.26
VPS13CQ709C8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
VPS13CQ709C8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.45□□□□□ -0.26
VPS13CQ709C8 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
VPS13CQ709C8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
VPS13CQ709C8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 AL391256.1-201ENST00000443260 1855 ntBASIC13.45□□□□□ -0.26
VPS13CQ709C8 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.45□□□□□ -0.26
VPS13CQ709C8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.45□□□□□ -0.26
VPS13CQ709C8 AC007551.1-201ENST00000457394 519 ntBASIC13.45□□□□□ -0.26
VPS13CQ709C8 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.45□□□□□ -0.26
VPS13CQ709C8 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.45□□□□□ -0.26
VPS13CQ709C8 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.45□□□□□ -0.26
VPS13CQ709C8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VPS13CQ709C8 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13CQ709C8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13CQ709C8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13CQ709C8 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13CQ709C8 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13CQ709C8 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 CHMP4BP1-201ENST00000556017 588 ntBASIC13.44□□□□□ -0.26
VPS13CQ709C8 AC244669.2-201ENST00000612320 853 ntBASIC13.44□□□□□ -0.26
VPS13CQ709C8 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 KRT8P22-201ENST00000562317 1415 ntBASIC13.44□□□□□ -0.26
VPS13CQ709C8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13CQ709C8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13CQ709C8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13CQ709C8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13CQ709C8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13CQ709C8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13CQ709C8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13CQ709C8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13CQ709C8 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13CQ709C8 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13CQ709C8 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VPS13CQ709C8 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.44□□□□□ -0.26
VPS13CQ709C8 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms