Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.52■□□□□ 0.72
CREB3L3Q68CJ9 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CREB3L3Q68CJ9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CREB3L3Q68CJ9 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CREB3L3Q68CJ9 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.52■□□□□ 0.71
CREB3L3Q68CJ9 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CREB3L3Q68CJ9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CREB3L3Q68CJ9 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 FAM58CP-201ENST00000435741 640 ntBASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 PRYP6-201ENST00000514804 343 ntBASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 AC002347.1-201ENST00000569543 541 ntBASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CREB3L3Q68CJ9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 AL355306.1-201ENST00000415580 579 ntBASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 ADH5P3-201ENST00000433842 1137 ntBASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 AL589702.1-201ENST00000641229 1509 ntBASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.5■□□□□ 0.71
CREB3L3Q68CJ9 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 AC004832.2-201ENST00000426397 482 ntBASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.49■□□□□ 0.71
CREB3L3Q68CJ9 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms