Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC38Q5VT99 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 AC104109.2-201ENST00000602919 1418 ntBASIC17.04■□□□□ 0.32
LRRC38Q5VT99 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 AC016027.1-202ENST00000607927 1699 ntBASIC17.04■□□□□ 0.32
LRRC38Q5VT99 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 BCAR1-209ENST00000546196 1340 ntBASIC17.04■□□□□ 0.32
LRRC38Q5VT99 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC38Q5VT99 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 AC073439.1-201ENST00000624121 1774 ntBASIC17.03■□□□□ 0.32
LRRC38Q5VT99 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC38Q5VT99 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms