Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CDCA8Q53HL2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
CDCA8Q53HL2 REXO1L8P-201ENST00000604378 1897 ntBASIC22.56■■□□□ 1.2
CDCA8Q53HL2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDCA8Q53HL2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 CETN4P-206ENST00000642099 2168 ntBASIC22.55■■□□□ 1.2
CDCA8Q53HL2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 AC092580.3-201ENST00000430932 139 ntBASIC22.55■■□□□ 1.2
CDCA8Q53HL2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 AL139010.1-201ENST00000454878 894 ntBASIC22.55■■□□□ 1.2
CDCA8Q53HL2 LY6E-204ENST00000519546 971 ntTSL 2 BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 PCDHA12-202ENST00000613593 2588 ntBASIC22.55■■□□□ 1.2
CDCA8Q53HL2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDCA8Q53HL2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 CCDC74BP1-201ENST00000508880 1123 ntBASIC22.54■■□□□ 1.2
CDCA8Q53HL2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 AC011467.4-201ENST00000594891 528 ntBASIC22.54■■□□□ 1.2
CDCA8Q53HL2 SPDYE12P-201ENST00000618416 771 ntBASIC22.54■■□□□ 1.2
CDCA8Q53HL2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC22.54■■□□□ 1.2
CDCA8Q53HL2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 LTB4R2-202ENST00000528054 3092 ntBASIC22.53■■□□□ 1.2
CDCA8Q53HL2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDCA8Q53HL2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDCA8Q53HL2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms