Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 FAM220BP-201ENST00000377689 816 ntBASIC19.75■□□□□ 0.75
RFX7Q2KHR2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 AC073592.8-201ENST00000624126 511 ntBASIC19.75■□□□□ 0.75
RFX7Q2KHR2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.75■□□□□ 0.75
RFX7Q2KHR2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 MIR648-201ENST00000385046 94 ntBASIC19.74■□□□□ 0.75
RFX7Q2KHR2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 TSPY16P-201ENST00000449843 468 ntBASIC19.74■□□□□ 0.75
RFX7Q2KHR2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 AC008761.3-201ENST00000624803 892 ntBASIC19.74■□□□□ 0.75
RFX7Q2KHR2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 AC100757.3-201ENST00000622361 1406 ntBASIC19.74■□□□□ 0.75
RFX7Q2KHR2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX7Q2KHR2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 HLA-H-201ENST00000383620 1096 ntBASIC19.73■□□□□ 0.75
RFX7Q2KHR2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 AC098859.1-201ENST00000502915 1238 ntBASIC19.73■□□□□ 0.75
RFX7Q2KHR2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 MIR4321-201ENST00000592276 80 ntBASIC19.73■□□□□ 0.75
RFX7Q2KHR2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RFX7Q2KHR2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms