Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGCS1Q01581 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGCS1Q01581 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCS1Q01581 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCS1Q01581 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCS1Q01581 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCS1Q01581 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCS1Q01581 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCS1Q01581 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCS1Q01581 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCS1Q01581 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCS1Q01581 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCS1Q01581 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCS1Q01581 HMGA1P7-201ENST00000406908 502 ntBASIC15.88■□□□□ 0.13
HMGCS1Q01581 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.88■□□□□ 0.13
HMGCS1Q01581 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCS1Q01581 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCS1Q01581 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCS1Q01581 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCS1Q01581 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCS1Q01581 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCS1Q01581 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HMGCS1Q01581 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCS1Q01581 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HMGCS1Q01581 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCS1Q01581 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.87■□□□□ 0.13
HMGCS1Q01581 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCS1Q01581 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.87■□□□□ 0.13
HMGCS1Q01581 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCS1Q01581 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.87■□□□□ 0.13
HMGCS1Q01581 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCS1Q01581 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCS1Q01581 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCS1Q01581 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCS1Q01581 AC105917.1-201ENST00000506637 2539 ntBASIC15.87■□□□□ 0.13
HMGCS1Q01581 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCS1Q01581 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCS1Q01581 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCS1Q01581 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.87■□□□□ 0.13
HMGCS1Q01581 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HMGCS1Q01581 PRSS29P-201ENST00000440800 595 ntBASIC15.87■□□□□ 0.13
HMGCS1Q01581 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.87■□□□□ 0.13
HMGCS1Q01581 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.87■□□□□ 0.13
HMGCS1Q01581 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.87■□□□□ 0.13
HMGCS1Q01581 AC116407.3-201ENST00000623905 1129 ntBASIC15.87■□□□□ 0.13
HMGCS1Q01581 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCS1Q01581 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCS1Q01581 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.87■□□□□ 0.13
HMGCS1Q01581 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCS1Q01581 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.87■□□□□ 0.13
HMGCS1Q01581 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCS1Q01581 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
HMGCS1Q01581 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.87■□□□□ 0.13
HMGCS1Q01581 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCS1Q01581 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HMGCS1Q01581 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.87■□□□□ 0.13
HMGCS1Q01581 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCS1Q01581 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HMGCS1Q01581 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 AC005622.1-201ENST00000636801 1703 ntBASIC15.86■□□□□ 0.13
HMGCS1Q01581 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms