Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.55□□□□□ -0.08
NKX6-1P78426 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.55□□□□□ -0.08
NKX6-1P78426 TERF1P3-201ENST00000505638 1227 ntBASIC14.55□□□□□ -0.08
NKX6-1P78426 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.55□□□□□ -0.08
NKX6-1P78426 FAM86C2P-203ENST00000528684 1004 ntBASIC14.55□□□□□ -0.08
NKX6-1P78426 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.55□□□□□ -0.08
NKX6-1P78426 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.55□□□□□ -0.08
NKX6-1P78426 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.55□□□□□ -0.08
NKX6-1P78426 MIR4515-201ENST00000584082 81 ntBASIC14.55□□□□□ -0.08
NKX6-1P78426 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.55□□□□□ -0.08
NKX6-1P78426 AL390955.2-201ENST00000603032 514 ntBASIC14.55□□□□□ -0.08
NKX6-1P78426 AL136317.3-201ENST00000618497 906 ntBASIC14.55□□□□□ -0.08
NKX6-1P78426 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 AC108860.2-201ENST00000562760 2183 ntBASIC14.55□□□□□ -0.08
NKX6-1P78426 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.55□□□□□ -0.08
NKX6-1P78426 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.55□□□□□ -0.08
NKX6-1P78426 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NKX6-1P78426 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.55□□□□□ -0.08
NKX6-1P78426 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NKX6-1P78426 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NKX6-1P78426 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.55□□□□□ -0.08
NKX6-1P78426 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.55□□□□□ -0.08
NKX6-1P78426 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.55□□□□□ -0.08
NKX6-1P78426 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NKX6-1P78426 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NKX6-1P78426 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
NKX6-1P78426 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NKX6-1P78426 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.54□□□□□ -0.08
NKX6-1P78426 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.54□□□□□ -0.08
NKX6-1P78426 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 GK-202ENST00000378941 458 ntTSL 3 BASIC14.54□□□□□ -0.08
NKX6-1P78426 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.54□□□□□ -0.08
NKX6-1P78426 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.54□□□□□ -0.08
NKX6-1P78426 AL671277.1-201ENST00000429656 993 ntBASIC14.54□□□□□ -0.08
NKX6-1P78426 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 SPDYE11-202ENST00000450699 704 ntBASIC14.54□□□□□ -0.08
NKX6-1P78426 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
NKX6-1P78426 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.54□□□□□ -0.08
NKX6-1P78426 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.54□□□□□ -0.08
NKX6-1P78426 SPDYE9P-201ENST00000570642 692 ntBASIC14.54□□□□□ -0.08
NKX6-1P78426 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 SPDYE10P-202ENST00000612005 668 ntBASIC14.54□□□□□ -0.08
NKX6-1P78426 SPDYE8P-202ENST00000612377 668 ntBASIC14.54□□□□□ -0.08
NKX6-1P78426 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
NKX6-1P78426 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NKX6-1P78426 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.54□□□□□ -0.08
NKX6-1P78426 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
NKX6-1P78426 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.54□□□□□ -0.08
NKX6-1P78426 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.54□□□□□ -0.08
NKX6-1P78426 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.54□□□□□ -0.08
NKX6-1P78426 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NKX6-1P78426 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-1P78426 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-1P78426 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
NKX6-1P78426 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-1P78426 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-1P78426 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.53□□□□□ -0.08
NKX6-1P78426 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
NKX6-1P78426 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-1P78426 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-1P78426 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-1P78426 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NKX6-1P78426 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms