Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VBP1P61758 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VBP1P61758 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
VBP1P61758 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.8□□□□□ -0.04
VBP1P61758 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VBP1P61758 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.8□□□□□ -0.04
VBP1P61758 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.8□□□□□ -0.04
VBP1P61758 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
VBP1P61758 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VBP1P61758 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
VBP1P61758 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
VBP1P61758 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VBP1P61758 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VBP1P61758 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VBP1P61758 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.8□□□□□ -0.04
VBP1P61758 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VBP1P61758 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.8□□□□□ -0.04
VBP1P61758 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VBP1P61758 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VBP1P61758 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
VBP1P61758 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.8□□□□□ -0.04
VBP1P61758 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.79□□□□□ -0.04
VBP1P61758 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
VBP1P61758 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.79□□□□□ -0.04
VBP1P61758 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.79□□□□□ -0.04
VBP1P61758 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 UNC93B2-201ENST00000285383 730 ntBASIC14.79□□□□□ -0.04
VBP1P61758 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 ABHD17AP1-201ENST00000358206 933 ntBASIC14.79□□□□□ -0.04
VBP1P61758 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.79□□□□□ -0.04
VBP1P61758 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.79□□□□□ -0.04
VBP1P61758 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.79□□□□□ -0.04
VBP1P61758 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 AC034232.1-201ENST00000506026 1064 ntBASIC14.79□□□□□ -0.04
VBP1P61758 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.79□□□□□ -0.04
VBP1P61758 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
VBP1P61758 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.79□□□□□ -0.04
VBP1P61758 C2orf69P3-201ENST00000565542 1120 ntBASIC14.79□□□□□ -0.04
VBP1P61758 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 AC026471.5-201ENST00000615068 467 ntBASIC14.79□□□□□ -0.04
VBP1P61758 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.79□□□□□ -0.04
VBP1P61758 LINC01101-201ENST00000622953 1884 ntBASIC14.79□□□□□ -0.04
VBP1P61758 LINC00552-201ENST00000625151 2579 ntBASIC14.79□□□□□ -0.04
VBP1P61758 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.79□□□□□ -0.04
VBP1P61758 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
VBP1P61758 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.79□□□□□ -0.04
VBP1P61758 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VBP1P61758 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.79□□□□□ -0.04
VBP1P61758 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
VBP1P61758 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.78□□□□□ -0.04
VBP1P61758 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
VBP1P61758 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.78□□□□□ -0.04
VBP1P61758 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.78□□□□□ -0.04
VBP1P61758 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 SNX33P1-201ENST00000592116 1762 ntBASIC14.78□□□□□ -0.04
VBP1P61758 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VBP1P61758 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VBP1P61758 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.78□□□□□ -0.04
VBP1P61758 AL353593.2-201ENST00000602529 1483 ntBASIC14.78□□□□□ -0.04
VBP1P61758 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
VBP1P61758 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.78□□□□□ -0.04
VBP1P61758 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
VBP1P61758 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VBP1P61758 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VBP1P61758 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
VBP1P61758 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
VBP1P61758 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms