Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ERVFC1-1P60608 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
ERVFC1-1P60608 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC12.85□□□□□ -0.35
ERVFC1-1P60608 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
ERVFC1-1P60608 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ERVFC1-1P60608 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ERVFC1-1P60608 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ERVFC1-1P60608 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC12.85□□□□□ -0.35
ERVFC1-1P60608 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.85□□□□□ -0.35
ERVFC1-1P60608 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ERVFC1-1P60608 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.85□□□□□ -0.35
ERVFC1-1P60608 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 COX5BP2-201ENST00000392354 334 ntBASIC12.84□□□□□ -0.35
ERVFC1-1P60608 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 DUT-205ENST00000558813 769 ntTSL 2 BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 AC109462.3-201ENST00000573934 613 ntBASIC12.84□□□□□ -0.35
ERVFC1-1P60608 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 CYP2D8P-201ENST00000433633 1490 ntBASIC12.84□□□□□ -0.35
ERVFC1-1P60608 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ERVFC1-1P60608 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
ERVFC1-1P60608 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
ERVFC1-1P60608 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
ERVFC1-1P60608 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
ERVFC1-1P60608 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
ERVFC1-1P60608 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.83□□□□□ -0.35
ERVFC1-1P60608 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.83□□□□□ -0.35
ERVFC1-1P60608 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
ERVFC1-1P60608 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
ERVFC1-1P60608 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
ERVFC1-1P60608 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ERVFC1-1P60608 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC12.83□□□□□ -0.35
ERVFC1-1P60608 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 TERF1P1-201ENST00000311003 1181 ntBASIC12.83□□□□□ -0.36
ERVFC1-1P60608 ARMC10P1-201ENST00000313754 855 ntBASIC12.83□□□□□ -0.36
ERVFC1-1P60608 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 GPX4-207ENST00000589115 812 ntTSL 2 BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12.83□□□□□ -0.36
ERVFC1-1P60608 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms