Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.14■□□□□ 0.33
ERVFC1P60507 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERVFC1P60507 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ERVFC1P60507 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
ERVFC1P60507 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ERVFC1P60507 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.14■□□□□ 0.33
ERVFC1P60507 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERVFC1P60507 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.14■□□□□ 0.33
ERVFC1P60507 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERVFC1P60507 CYP4F24P-201ENST00000586049 1580 ntBASIC17.14■□□□□ 0.33
ERVFC1P60507 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERVFC1P60507 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ERVFC1P60507 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERVFC1P60507 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ERVFC1P60507 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERVFC1P60507 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ERVFC1P60507 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ERVFC1P60507 AL603756.1-201ENST00000606511 2163 ntBASIC17.13■□□□□ 0.33
ERVFC1P60507 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.13■□□□□ 0.33
ERVFC1P60507 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERVFC1P60507 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERVFC1P60507 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERVFC1P60507 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERVFC1P60507 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ERVFC1P60507 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.13■□□□□ 0.33
ERVFC1P60507 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ERVFC1P60507 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERVFC1P60507 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERVFC1P60507 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERVFC1P60507 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERVFC1P60507 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERVFC1P60507 FAM86MP-201ENST00000340703 885 ntBASIC17.13■□□□□ 0.33
ERVFC1P60507 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERVFC1P60507 BNIP3P42-201ENST00000454982 569 ntBASIC17.13■□□□□ 0.33
ERVFC1P60507 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.13■□□□□ 0.33
ERVFC1P60507 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.13■□□□□ 0.33
ERVFC1P60507 AC104596.2-201ENST00000512793 793 ntBASIC17.13■□□□□ 0.33
ERVFC1P60507 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ERVFC1P60507 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.13■□□□□ 0.33
ERVFC1P60507 AC015936.2-201ENST00000593177 259 ntBASIC17.13■□□□□ 0.33
ERVFC1P60507 BNIP3P29-201ENST00000598302 571 ntBASIC17.13■□□□□ 0.33
ERVFC1P60507 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ERVFC1P60507 AC011447.5-201ENST00000616168 564 ntBASIC17.13■□□□□ 0.33
ERVFC1P60507 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ERVFC1P60507 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.13■□□□□ 0.33
ERVFC1P60507 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERVFC1P60507 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERVFC1P60507 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERVFC1P60507 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERVFC1P60507 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERVFC1P60507 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ERVFC1P60507 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERVFC1P60507 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERVFC1P60507 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.13■□□□□ 0.33
ERVFC1P60507 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.13■□□□□ 0.33
ERVFC1P60507 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERVFC1P60507 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ERVFC1P60507 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERVFC1P60507 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERVFC1P60507 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.12■□□□□ 0.33
ERVFC1P60507 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.12■□□□□ 0.33
ERVFC1P60507 U82695.1-201ENST00000635752 1889 ntBASIC17.12■□□□□ 0.33
ERVFC1P60507 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ERVFC1P60507 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERVFC1P60507 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ERVFC1P60507 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.12■□□□□ 0.33
ERVFC1P60507 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.12■□□□□ 0.33
ERVFC1P60507 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ERVFC1P60507 AC104989.1-201ENST00000519711 778 ntBASIC17.12■□□□□ 0.33
ERVFC1P60507 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.12■□□□□ 0.33
ERVFC1P60507 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.12■□□□□ 0.33
ERVFC1P60507 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.12■□□□□ 0.33
ERVFC1P60507 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.12■□□□□ 0.33
ERVFC1P60507 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.12■□□□□ 0.33
ERVFC1P60507 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.12■□□□□ 0.33
ERVFC1P60507 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.12■□□□□ 0.33
ERVFC1P60507 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.12■□□□□ 0.33
ERVFC1P60507 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.12■□□□□ 0.33
ERVFC1P60507 BTNL10-201ENST00000595971 695 ntBASIC17.12■□□□□ 0.33
ERVFC1P60507 AL606495.2-201ENST00000605867 535 ntBASIC17.12■□□□□ 0.33
ERVFC1P60507 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.12■□□□□ 0.33
ERVFC1P60507 AC060834.1-201ENST00000443027 2032 ntBASIC17.12■□□□□ 0.33
ERVFC1P60507 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERVFC1P60507 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ERVFC1P60507 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERVFC1P60507 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERVFC1P60507 HCG11-201ENST00000411553 5696 ntBASIC17.12■□□□□ 0.33
ERVFC1P60507 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERVFC1P60507 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.12■□□□□ 0.33
ERVFC1P60507 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERVFC1P60507 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.12■□□□□ 0.33
ERVFC1P60507 PCGF3-213ENST00000620529 1899 ntBASIC17.12■□□□□ 0.33
ERVFC1P60507 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
ERVFC1P60507 AL133373.2-201ENST00000623187 2828 ntBASIC17.11■□□□□ 0.33
ERVFC1P60507 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ERVFC1P60507 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.11■□□□□ 0.33
ERVFC1P60507 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERVFC1P60507 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.11■□□□□ 0.33
ERVFC1P60507 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ERVFC1P60507 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms