Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RIPK4P57078 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.02
RIPK4P57078 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RIPK4P57078 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RIPK4P57078 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC21.44■■□□□ 1.02
RIPK4P57078 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RIPK4P57078 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC21.44■■□□□ 1.02
RIPK4P57078 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
RIPK4P57078 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RIPK4P57078 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RIPK4P57078 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC21.44■■□□□ 1.02
RIPK4P57078 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RIPK4P57078 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RIPK4P57078 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RIPK4P57078 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RIPK4P57078 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC21.44■■□□□ 1.02
RIPK4P57078 CNN2P2-201ENST00000443536 909 ntBASIC21.44■■□□□ 1.02
RIPK4P57078 CNN2P3-201ENST00000450201 906 ntBASIC21.44■■□□□ 1.02
RIPK4P57078 PPP6R2P1-201ENST00000450880 1275 ntBASIC21.44■■□□□ 1.02
RIPK4P57078 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC21.44■■□□□ 1.02
RIPK4P57078 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
RIPK4P57078 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC21.44■■□□□ 1.02
RIPK4P57078 AC093512.1-201ENST00000617969 520 ntBASIC21.44■■□□□ 1.02
RIPK4P57078 AL136317.3-201ENST00000618497 906 ntBASIC21.44■■□□□ 1.02
RIPK4P57078 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC21.44■■□□□ 1.02
RIPK4P57078 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC21.44■■□□□ 1.02
RIPK4P57078 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RIPK4P57078 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
RIPK4P57078 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RIPK4P57078 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
RIPK4P57078 AL592424.1-201ENST00000563624 1536 ntBASIC21.44■■□□□ 1.02
RIPK4P57078 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC21.44■■□□□ 1.02
RIPK4P57078 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
RIPK4P57078 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RIPK4P57078 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK4P57078 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK4P57078 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK4P57078 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC21.43■■□□□ 1.02
RIPK4P57078 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK4P57078 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK4P57078 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK4P57078 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK4P57078 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK4P57078 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK4P57078 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK4P57078 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK4P57078 FAM86GP-201ENST00000448322 971 ntBASIC21.43■■□□□ 1.02
RIPK4P57078 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC21.43■■□□□ 1.02
RIPK4P57078 DUX4L27-201ENST00000554796 1261 ntBASIC21.43■■□□□ 1.02
RIPK4P57078 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK4P57078 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK4P57078 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK4P57078 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
RIPK4P57078 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK4P57078 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK4P57078 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK4P57078 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK4P57078 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
RIPK4P57078 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK4P57078 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RIPK4P57078 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC21.43■■□□□ 1.02
RIPK4P57078 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RIPK4P57078 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RIPK4P57078 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RIPK4P57078 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RIPK4P57078 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RIPK4P57078 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
RIPK4P57078 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RIPK4P57078 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RIPK4P57078 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RIPK4P57078 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RIPK4P57078 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RIPK4P57078 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
RIPK4P57078 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RIPK4P57078 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC21.42■■□□□ 1.02
RIPK4P57078 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.42■■□□□ 1.02
RIPK4P57078 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RIPK4P57078 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC21.42■■□□□ 1.02
RIPK4P57078 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21.42■■□□□ 1.02
RIPK4P57078 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.42■■□□□ 1.02
RIPK4P57078 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC21.42■■□□□ 1.02
RIPK4P57078 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RIPK4P57078 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC21.42■■□□□ 1.02
RIPK4P57078 ORC5-208ENST00000626700 344 ntTSL 3 BASIC21.42■■□□□ 1.02
RIPK4P57078 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RIPK4P57078 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RIPK4P57078 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RIPK4P57078 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC21.42■■□□□ 1.02
RIPK4P57078 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC21.42■■□□□ 1.02
RIPK4P57078 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RIPK4P57078 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
RIPK4P57078 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC21.41■■□□□ 1.02
RIPK4P57078 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RIPK4P57078 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RIPK4P57078 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC21.41■■□□□ 1.02
RIPK4P57078 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC21.41■■□□□ 1.02
RIPK4P57078 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RIPK4P57078 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC21.41■■□□□ 1.02
RIPK4P57078 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC21.41■■□□□ 1.02
RIPK4P57078 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms