Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXG1P55316 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FOXG1P55316 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
FOXG1P55316 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXG1P55316 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
FOXG1P55316 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.39□□□□□ -0.11
FOXG1P55316 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.39□□□□□ -0.11
FOXG1P55316 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FOXG1P55316 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.39□□□□□ -0.11
FOXG1P55316 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXG1P55316 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
FOXG1P55316 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXG1P55316 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXG1P55316 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXG1P55316 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.38□□□□□ -0.11
FOXG1P55316 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXG1P55316 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXG1P55316 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.38□□□□□ -0.11
FOXG1P55316 REXO1L8P-201ENST00000604378 1897 ntBASIC14.38□□□□□ -0.11
FOXG1P55316 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
FOXG1P55316 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
FOXG1P55316 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXG1P55316 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.38□□□□□ -0.11
FOXG1P55316 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.38□□□□□ -0.11
FOXG1P55316 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.38□□□□□ -0.11
FOXG1P55316 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.38□□□□□ -0.11
FOXG1P55316 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXG1P55316 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.38□□□□□ -0.11
FOXG1P55316 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.38□□□□□ -0.11
FOXG1P55316 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.38□□□□□ -0.11
FOXG1P55316 RARRES2P9-201ENST00000565168 469 ntBASIC14.38□□□□□ -0.11
FOXG1P55316 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXG1P55316 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.38□□□□□ -0.11
FOXG1P55316 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.38□□□□□ -0.11
FOXG1P55316 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.38□□□□□ -0.11
FOXG1P55316 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.38□□□□□ -0.11
FOXG1P55316 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
FOXG1P55316 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXG1P55316 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXG1P55316 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXG1P55316 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
FOXG1P55316 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXG1P55316 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
FOXG1P55316 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXG1P55316 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXG1P55316 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
FOXG1P55316 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.38□□□□□ -0.11
FOXG1P55316 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.38□□□□□ -0.11
FOXG1P55316 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXG1P55316 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXG1P55316 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.38□□□□□ -0.11
FOXG1P55316 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.38□□□□□ -0.11
FOXG1P55316 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXG1P55316 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXG1P55316 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXG1P55316 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
FOXG1P55316 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.37□□□□□ -0.11
FOXG1P55316 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXG1P55316 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.37□□□□□ -0.11
FOXG1P55316 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXG1P55316 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXG1P55316 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.37□□□□□ -0.11
FOXG1P55316 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.37□□□□□ -0.11
FOXG1P55316 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.37□□□□□ -0.11
FOXG1P55316 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
FOXG1P55316 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXG1P55316 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXG1P55316 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXG1P55316 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXG1P55316 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXG1P55316 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXG1P55316 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
FOXG1P55316 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXG1P55316 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.37□□□□□ -0.11
FOXG1P55316 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
FOXG1P55316 AC098859.1-201ENST00000502915 1238 ntBASIC14.37□□□□□ -0.11
FOXG1P55316 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.37□□□□□ -0.11
FOXG1P55316 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
FOXG1P55316 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
FOXG1P55316 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.37□□□□□ -0.11
FOXG1P55316 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXG1P55316 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.37□□□□□ -0.11
FOXG1P55316 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXG1P55316 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
FOXG1P55316 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXG1P55316 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXG1P55316 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXG1P55316 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXG1P55316 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
FOXG1P55316 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXG1P55316 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.37□□□□□ -0.11
FOXG1P55316 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.37□□□□□ -0.11
FOXG1P55316 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.37□□□□□ -0.11
FOXG1P55316 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.37□□□□□ -0.11
FOXG1P55316 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXG1P55316 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXG1P55316 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.37□□□□□ -0.11
FOXG1P55316 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.37□□□□□ -0.11
FOXG1P55316 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
FOXG1P55316 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms