Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
APOC4P55056 FAM220BP-201ENST00000377689 816 ntBASIC12.04□□□□□ -0.48
APOC4P55056 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.04□□□□□ -0.48
APOC4P55056 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.04□□□□□ -0.48
APOC4P55056 AL512638.1-201ENST00000457493 794 ntBASIC12.04□□□□□ -0.48
APOC4P55056 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.04□□□□□ -0.48
APOC4P55056 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
APOC4P55056 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.04□□□□□ -0.48
APOC4P55056 AC093214.1-201ENST00000511688 1107 ntBASIC12.04□□□□□ -0.48
APOC4P55056 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.04□□□□□ -0.48
APOC4P55056 AC051619.7-201ENST00000568314 623 ntBASIC12.04□□□□□ -0.48
APOC4P55056 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.04□□□□□ -0.48
APOC4P55056 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.04□□□□□ -0.48
APOC4P55056 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
APOC4P55056 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.04□□□□□ -0.48
APOC4P55056 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
APOC4P55056 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.04□□□□□ -0.48
APOC4P55056 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
APOC4P55056 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.04□□□□□ -0.48
APOC4P55056 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.04□□□□□ -0.48
APOC4P55056 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC12.04□□□□□ -0.48
APOC4P55056 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC4P55056 AC067930.6-201ENST00000623257 4947 ntBASIC12.04□□□□□ -0.48
APOC4P55056 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
APOC4P55056 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
APOC4P55056 AP001094.4-201ENST00000579008 2176 ntBASIC12.03□□□□□ -0.48
APOC4P55056 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.03□□□□□ -0.48
APOC4P55056 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 AL512652.2-201ENST00000625156 1716 ntBASIC12.03□□□□□ -0.48
APOC4P55056 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
APOC4P55056 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.03□□□□□ -0.48
APOC4P55056 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.03□□□□□ -0.48
APOC4P55056 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
APOC4P55056 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
APOC4P55056 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.03□□□□□ -0.48
APOC4P55056 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.03□□□□□ -0.48
APOC4P55056 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.03□□□□□ -0.48
APOC4P55056 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.03□□□□□ -0.48
APOC4P55056 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.03□□□□□ -0.48
APOC4P55056 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.03□□□□□ -0.48
APOC4P55056 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
APOC4P55056 AC092364.2-202ENST00000597012 1073 ntBASIC12.03□□□□□ -0.48
APOC4P55056 AC026979.3-201ENST00000607315 403 ntBASIC12.03□□□□□ -0.48
APOC4P55056 AL158211.3-201ENST00000607385 239 ntBASIC12.03□□□□□ -0.48
APOC4P55056 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.03□□□□□ -0.48
APOC4P55056 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
APOC4P55056 AC008677.1-201ENST00000519230 1561 ntBASIC12.03□□□□□ -0.48
APOC4P55056 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.03□□□□□ -0.48
APOC4P55056 AP3S2-216ENST00000617003 1561 ntBASIC12.03□□□□□ -0.48
APOC4P55056 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.03□□□□□ -0.48
APOC4P55056 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.03□□□□□ -0.48
APOC4P55056 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
APOC4P55056 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
APOC4P55056 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC12.03□□□□□ -0.48
APOC4P55056 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
APOC4P55056 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
APOC4P55056 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms