Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGCS2P54868 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HMGCS2P54868 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HMGCS2P54868 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGCS2P54868 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
HMGCS2P54868 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HMGCS2P54868 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.83■□□□□ 0.6
HMGCS2P54868 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.82■□□□□ 0.6
HMGCS2P54868 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS2P54868 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
HMGCS2P54868 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.82■□□□□ 0.6
HMGCS2P54868 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS2P54868 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
HMGCS2P54868 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HMGCS2P54868 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS2P54868 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
HMGCS2P54868 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS2P54868 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS2P54868 MIR658-201ENST00000385210 100 ntBASIC18.82■□□□□ 0.6
HMGCS2P54868 TMEM14DP-201ENST00000422205 345 ntBASIC18.82■□□□□ 0.6
HMGCS2P54868 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.82■□□□□ 0.6
HMGCS2P54868 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS2P54868 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.82■□□□□ 0.6
HMGCS2P54868 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.82■□□□□ 0.6
HMGCS2P54868 AC106886.1-201ENST00000568660 600 ntBASIC18.82■□□□□ 0.6
HMGCS2P54868 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.82■□□□□ 0.6
HMGCS2P54868 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.82■□□□□ 0.6
HMGCS2P54868 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS2P54868 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.82■□□□□ 0.6
HMGCS2P54868 AC093726.1-201ENST00000608064 963 ntBASIC18.82■□□□□ 0.6
HMGCS2P54868 MIR6805-201ENST00000615055 62 ntBASIC18.82■□□□□ 0.6
HMGCS2P54868 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS2P54868 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS2P54868 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.82■□□□□ 0.6
HMGCS2P54868 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS2P54868 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HMGCS2P54868 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS2P54868 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS2P54868 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS2P54868 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
HMGCS2P54868 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS2P54868 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
HMGCS2P54868 U82695.1-201ENST00000635752 1889 ntBASIC18.82■□□□□ 0.6
HMGCS2P54868 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS2P54868 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS2P54868 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCS2P54868 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HMGCS2P54868 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HMGCS2P54868 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HMGCS2P54868 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCS2P54868 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HMGCS2P54868 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.81■□□□□ 0.6
HMGCS2P54868 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HMGCS2P54868 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HMGCS2P54868 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCS2P54868 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCS2P54868 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCS2P54868 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.81■□□□□ 0.6
HMGCS2P54868 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCS2P54868 OR6D1P-202ENST00000641007 5290 ntBASIC18.81■□□□□ 0.6
HMGCS2P54868 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HMGCS2P54868 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCS2P54868 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.81■□□□□ 0.6
HMGCS2P54868 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.81■□□□□ 0.6
HMGCS2P54868 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.81■□□□□ 0.6
HMGCS2P54868 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.81■□□□□ 0.6
HMGCS2P54868 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.81■□□□□ 0.6
HMGCS2P54868 AC092337.1-201ENST00000568699 1129 ntBASIC18.81■□□□□ 0.6
HMGCS2P54868 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.81■□□□□ 0.6
HMGCS2P54868 AC025048.3-201ENST00000590609 569 ntBASIC18.81■□□□□ 0.6
HMGCS2P54868 AC074044.1-201ENST00000609673 707 ntBASIC18.81■□□□□ 0.6
HMGCS2P54868 AC005702.4-201ENST00000618393 416 ntBASIC18.81■□□□□ 0.6
HMGCS2P54868 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCS2P54868 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HMGCS2P54868 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
HMGCS2P54868 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCS2P54868 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCS2P54868 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCS2P54868 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.81■□□□□ 0.6
HMGCS2P54868 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCS2P54868 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCS2P54868 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCS2P54868 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCS2P54868 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCS2P54868 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCS2P54868 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HMGCS2P54868 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCS2P54868 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCS2P54868 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCS2P54868 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCS2P54868 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HMGCS2P54868 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.8■□□□□ 0.6
HMGCS2P54868 HIST3H2BA-201ENST00000436555 524 ntBASIC18.8■□□□□ 0.6
HMGCS2P54868 RPS2P32-201ENST00000439199 892 ntBASIC18.8■□□□□ 0.6
HMGCS2P54868 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.8■□□□□ 0.6
HMGCS2P54868 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMGCS2P54868 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.8■□□□□ 0.6
HMGCS2P54868 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.8■□□□□ 0.6
HMGCS2P54868 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.8■□□□□ 0.6
HMGCS2P54868 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms