Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAD23BP54727 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.59■□□□□ 0.41
RAD23BP54727 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAD23BP54727 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.59■□□□□ 0.41
RAD23BP54727 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAD23BP54727 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RAD23BP54727 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAD23BP54727 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAD23BP54727 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAD23BP54727 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RAD23BP54727 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAD23BP54727 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.59■□□□□ 0.41
RAD23BP54727 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.59■□□□□ 0.41
RAD23BP54727 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.59■□□□□ 0.41
RAD23BP54727 CEND1P1-201ENST00000451006 455 ntBASIC17.59■□□□□ 0.41
RAD23BP54727 KRT8P48-201ENST00000515599 1220 ntBASIC17.59■□□□□ 0.41
RAD23BP54727 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.59■□□□□ 0.41
RAD23BP54727 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.59■□□□□ 0.41
RAD23BP54727 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAD23BP54727 AC243562.1-201ENST00000560672 389 ntBASIC17.59■□□□□ 0.41
RAD23BP54727 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.59■□□□□ 0.41
RAD23BP54727 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RAD23BP54727 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.59■□□□□ 0.41
RAD23BP54727 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAD23BP54727 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
RAD23BP54727 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.59■□□□□ 0.41
RAD23BP54727 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.59■□□□□ 0.41
RAD23BP54727 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RAD23BP54727 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAD23BP54727 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAD23BP54727 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RAD23BP54727 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.59■□□□□ 0.41
RAD23BP54727 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAD23BP54727 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAD23BP54727 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.58■□□□□ 0.41
RAD23BP54727 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAD23BP54727 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.58■□□□□ 0.41
RAD23BP54727 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.58■□□□□ 0.41
RAD23BP54727 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAD23BP54727 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.58■□□□□ 0.4
RAD23BP54727 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.58■□□□□ 0.4
RAD23BP54727 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAD23BP54727 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAD23BP54727 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAD23BP54727 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.58■□□□□ 0.4
RAD23BP54727 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAD23BP54727 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAD23BP54727 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.58■□□□□ 0.4
RAD23BP54727 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.58■□□□□ 0.4
RAD23BP54727 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.58■□□□□ 0.4
RAD23BP54727 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAD23BP54727 FAM86C2P-203ENST00000528684 1004 ntBASIC17.58■□□□□ 0.4
RAD23BP54727 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAD23BP54727 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.58■□□□□ 0.4
RAD23BP54727 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.58■□□□□ 0.4
RAD23BP54727 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.58■□□□□ 0.4
RAD23BP54727 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.58■□□□□ 0.4
RAD23BP54727 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAD23BP54727 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAD23BP54727 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAD23BP54727 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.58■□□□□ 0.4
RAD23BP54727 AC079328.2-201ENST00000561241 3354 ntBASIC17.58■□□□□ 0.4
RAD23BP54727 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.58■□□□□ 0.4
RAD23BP54727 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.58■□□□□ 0.4
RAD23BP54727 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAD23BP54727 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAD23BP54727 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.58■□□□□ 0.4
RAD23BP54727 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAD23BP54727 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAD23BP54727 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.57■□□□□ 0.4
RAD23BP54727 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAD23BP54727 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RAD23BP54727 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAD23BP54727 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAD23BP54727 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAD23BP54727 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAD23BP54727 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAD23BP54727 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAD23BP54727 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.57■□□□□ 0.4
RAD23BP54727 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAD23BP54727 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.57■□□□□ 0.4
RAD23BP54727 KRT18P13-201ENST00000400056 1290 ntBASIC17.57■□□□□ 0.4
RAD23BP54727 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.57■□□□□ 0.4
RAD23BP54727 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.57■□□□□ 0.4
RAD23BP54727 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RAD23BP54727 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.57■□□□□ 0.4
RAD23BP54727 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.57■□□□□ 0.4
RAD23BP54727 AL138918.1-201ENST00000568306 659 ntBASIC17.57■□□□□ 0.4
RAD23BP54727 AC026120.1-201ENST00000611536 926 ntBASIC17.57■□□□□ 0.4
RAD23BP54727 AC055717.3-201ENST00000622967 595 ntBASIC17.57■□□□□ 0.4
RAD23BP54727 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAD23BP54727 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAD23BP54727 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.57■□□□□ 0.4
RAD23BP54727 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAD23BP54727 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAD23BP54727 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.57■□□□□ 0.4
RAD23BP54727 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RAD23BP54727 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAD23BP54727 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAD23BP54727 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms