Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.19■□□□□ 0.18
LIMK1P53667 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.19■□□□□ 0.18
LIMK1P53667 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LIMK1P53667 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.19■□□□□ 0.18
LIMK1P53667 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.19■□□□□ 0.18
LIMK1P53667 CICP6-201ENST00000457191 2729 ntBASIC16.19■□□□□ 0.18
LIMK1P53667 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIMK1P53667 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIMK1P53667 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.19■□□□□ 0.18
LIMK1P53667 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LIMK1P53667 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
LIMK1P53667 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
LIMK1P53667 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIMK1P53667 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIMK1P53667 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.19■□□□□ 0.18
LIMK1P53667 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.19■□□□□ 0.18
LIMK1P53667 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.19■□□□□ 0.18
LIMK1P53667 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.19■□□□□ 0.18
LIMK1P53667 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIMK1P53667 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIMK1P53667 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
LIMK1P53667 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIMK1P53667 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
LIMK1P53667 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.19■□□□□ 0.18
LIMK1P53667 AC105021.1-202ENST00000570572 669 ntBASIC16.19■□□□□ 0.18
LIMK1P53667 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.19■□□□□ 0.18
LIMK1P53667 AL133215.2-201ENST00000609242 977 ntBASIC16.19■□□□□ 0.18
LIMK1P53667 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.19■□□□□ 0.18
LIMK1P53667 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LIMK1P53667 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LIMK1P53667 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LIMK1P53667 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.19■□□□□ 0.18
LIMK1P53667 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIMK1P53667 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIMK1P53667 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LIMK1P53667 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.19■□□□□ 0.18
LIMK1P53667 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
LIMK1P53667 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIMK1P53667 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.19■□□□□ 0.18
LIMK1P53667 FOXO1B-201ENST00000504678 1527 ntBASIC16.19■□□□□ 0.18
LIMK1P53667 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.19■□□□□ 0.18
LIMK1P53667 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LIMK1P53667 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LIMK1P53667 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.19■□□□□ 0.18
LIMK1P53667 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.19■□□□□ 0.18
LIMK1P53667 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LIMK1P53667 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.18■□□□□ 0.18
LIMK1P53667 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
LIMK1P53667 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.18■□□□□ 0.18
LIMK1P53667 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LIMK1P53667 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIMK1P53667 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIMK1P53667 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIMK1P53667 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.18■□□□□ 0.18
LIMK1P53667 AC114501.2-201ENST00000439631 535 ntBASIC16.18■□□□□ 0.18
LIMK1P53667 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.18■□□□□ 0.18
LIMK1P53667 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.18■□□□□ 0.18
LIMK1P53667 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.18■□□□□ 0.18
LIMK1P53667 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.18■□□□□ 0.18
LIMK1P53667 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.18■□□□□ 0.18
LIMK1P53667 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.18■□□□□ 0.18
LIMK1P53667 AC004790.1-201ENST00000612686 536 ntBASIC16.18■□□□□ 0.18
LIMK1P53667 MIR6869-201ENST00000619434 62 ntBASIC16.18■□□□□ 0.18
LIMK1P53667 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIMK1P53667 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.18■□□□□ 0.18
LIMK1P53667 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LIMK1P53667 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIMK1P53667 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIMK1P53667 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIMK1P53667 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LIMK1P53667 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LIMK1P53667 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LIMK1P53667 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LIMK1P53667 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LIMK1P53667 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.17■□□□□ 0.18
LIMK1P53667 AC106886.4-201ENST00000623557 2502 ntBASIC16.17■□□□□ 0.18
LIMK1P53667 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LIMK1P53667 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.17■□□□□ 0.18
LIMK1P53667 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.17■□□□□ 0.18
LIMK1P53667 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.17■□□□□ 0.18
LIMK1P53667 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.17■□□□□ 0.18
LIMK1P53667 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.17■□□□□ 0.18
LIMK1P53667 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.17■□□□□ 0.18
LIMK1P53667 MYCLP2-201ENST00000449268 967 ntBASIC16.17■□□□□ 0.18
LIMK1P53667 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LIMK1P53667 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms