Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA4P52798 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.72□□□□□ -0.21
EFNA4P52798 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA4P52798 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA4P52798 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA4P52798 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA4P52798 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA4P52798 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA4P52798 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA4P52798 GK-202ENST00000378941 458 ntTSL 3 BASIC13.72□□□□□ -0.21
EFNA4P52798 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA4P52798 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA4P52798 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
EFNA4P52798 NME2P1-201ENST00000426182 414 ntBASIC13.72□□□□□ -0.21
EFNA4P52798 AL139010.1-201ENST00000454878 894 ntBASIC13.72□□□□□ -0.21
EFNA4P52798 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.72□□□□□ -0.21
EFNA4P52798 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.72□□□□□ -0.21
EFNA4P52798 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
EFNA4P52798 AL132655.2-201ENST00000596276 594 ntBASIC13.72□□□□□ -0.21
EFNA4P52798 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA4P52798 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
EFNA4P52798 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA4P52798 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
EFNA4P52798 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA4P52798 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA4P52798 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA4P52798 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
EFNA4P52798 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
EFNA4P52798 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNA4P52798 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA4P52798 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.72□□□□□ -0.21
EFNA4P52798 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.72□□□□□ -0.21
EFNA4P52798 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.72□□□□□ -0.21
EFNA4P52798 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA4P52798 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
EFNA4P52798 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA4P52798 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EFNA4P52798 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
EFNA4P52798 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNA4P52798 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
EFNA4P52798 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
EFNA4P52798 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
EFNA4P52798 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA4P52798 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA4P52798 KRT8P12-202ENST00000472924 1397 ntBASIC13.71□□□□□ -0.21
EFNA4P52798 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.71□□□□□ -0.21
EFNA4P52798 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA4P52798 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA4P52798 AC139713.2-201ENST00000641328 2723 ntBASIC13.71□□□□□ -0.21
EFNA4P52798 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA4P52798 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA4P52798 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.71□□□□□ -0.21
EFNA4P52798 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.71□□□□□ -0.21
EFNA4P52798 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA4P52798 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
EFNA4P52798 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA4P52798 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.71□□□□□ -0.21
EFNA4P52798 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA4P52798 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA4P52798 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA4P52798 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA4P52798 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.71□□□□□ -0.21
EFNA4P52798 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.71□□□□□ -0.21
EFNA4P52798 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.71□□□□□ -0.21
EFNA4P52798 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA4P52798 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA4P52798 TP53TG3HP-202ENST00000569755 579 ntBASIC13.71□□□□□ -0.21
EFNA4P52798 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.71□□□□□ -0.21
EFNA4P52798 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
EFNA4P52798 AC004840.1-201ENST00000636359 365 ntBASIC13.71□□□□□ -0.21
EFNA4P52798 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.71□□□□□ -0.21
EFNA4P52798 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNA4P52798 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.71□□□□□ -0.21
EFNA4P52798 PCGF3-213ENST00000620529 1899 ntBASIC13.71□□□□□ -0.21
EFNA4P52798 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
EFNA4P52798 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
EFNA4P52798 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.71□□□□□ -0.22
EFNA4P52798 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
EFNA4P52798 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
EFNA4P52798 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
EFNA4P52798 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
EFNA4P52798 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.71□□□□□ -0.22
EFNA4P52798 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
EFNA4P52798 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
EFNA4P52798 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
EFNA4P52798 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.71□□□□□ -0.22
EFNA4P52798 AL391825.1-201ENST00000457671 1364 ntBASIC13.71□□□□□ -0.22
EFNA4P52798 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA4P52798 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
EFNA4P52798 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.7□□□□□ -0.22
EFNA4P52798 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
EFNA4P52798 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA4P52798 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA4P52798 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
EFNA4P52798 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA4P52798 LINC01144-201ENST00000626198 1710 ntBASIC13.7□□□□□ -0.22
EFNA4P52798 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA4P52798 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
EFNA4P52798 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
EFNA4P52798 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms