Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A6P48664 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC1A6P48664 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A6P48664 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A6P48664 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A6P48664 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A6P48664 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A6P48664 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC1A6P48664 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC1A6P48664 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC1A6P48664 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC1A6P48664 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SLC1A6P48664 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC1A6P48664 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC1A6P48664 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 PCED1CP-201ENST00000419887 785 ntBASIC16.21■□□□□ 0.19
SLC1A6P48664 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SLC1A6P48664 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC1A6P48664 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC1A6P48664 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SLC1A6P48664 AC020765.3-201ENST00000613051 740 ntBASIC16.21■□□□□ 0.19
SLC1A6P48664 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC1A6P48664 PI4KAP1-204ENST00000612579 1703 ntBASIC16.21■□□□□ 0.19
SLC1A6P48664 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SLC1A6P48664 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 AL353732.1-201ENST00000569618 1459 ntBASIC16.21■□□□□ 0.19
SLC1A6P48664 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC1A6P48664 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A6P48664 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
SLC1A6P48664 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC1A6P48664 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.21■□□□□ 0.18
SLC1A6P48664 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SLC1A6P48664 AP002414.2-201ENST00000591780 3365 ntBASIC16.21■□□□□ 0.18
SLC1A6P48664 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.21■□□□□ 0.18
SLC1A6P48664 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.21■□□□□ 0.18
SLC1A6P48664 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SLC1A6P48664 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
SLC1A6P48664 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.21■□□□□ 0.18
SLC1A6P48664 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
SLC1A6P48664 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A6P48664 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A6P48664 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC1A6P48664 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A6P48664 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A6P48664 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SLC1A6P48664 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A6P48664 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SLC1A6P48664 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC1A6P48664 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A6P48664 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A6P48664 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC1A6P48664 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A6P48664 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A6P48664 PTCHD3P3-201ENST00000403073 906 ntBASIC16.2■□□□□ 0.18
SLC1A6P48664 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A6P48664 SLC25A6P2-201ENST00000497974 877 ntBASIC16.2■□□□□ 0.18
SLC1A6P48664 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC1A6P48664 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC1A6P48664 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC1A6P48664 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC1A6P48664 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A6P48664 AL139288.1-201ENST00000623748 933 ntBASIC16.2■□□□□ 0.18
SLC1A6P48664 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A6P48664 AC006058.4-201ENST00000624016 1670 ntBASIC16.2■□□□□ 0.18
SLC1A6P48664 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A6P48664 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC1A6P48664 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A6P48664 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A6P48664 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A6P48664 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC1A6P48664 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A6P48664 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A6P48664 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SLC1A6P48664 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A6P48664 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC1A6P48664 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A6P48664 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC1A6P48664 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC1A6P48664 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A6P48664 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms