Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC1A1P43005 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SLC1A1P43005 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SLC1A1P43005 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC1A1P43005 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC1A1P43005 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 AP005117.1-202ENST00000581724 1908 ntBASIC17.22■□□□□ 0.35
SLC1A1P43005 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC1A1P43005 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC1A1P43005 IGLL3P-201ENST00000412472 434 ntBASIC17.22■□□□□ 0.35
SLC1A1P43005 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 AC093909.1-201ENST00000504731 1122 ntBASIC17.22■□□□□ 0.35
SLC1A1P43005 UNC93B6-202ENST00000528242 690 ntBASIC17.22■□□□□ 0.35
SLC1A1P43005 AC109635.5-201ENST00000533593 962 ntBASIC17.22■□□□□ 0.35
SLC1A1P43005 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC1A1P43005 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.22■□□□□ 0.35
SLC1A1P43005 AC096734.2-201ENST00000562054 433 ntBASIC17.22■□□□□ 0.35
SLC1A1P43005 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC1A1P43005 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SLC1A1P43005 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC1A1P43005 AL049840.3-201ENST00000602669 611 ntBASIC17.22■□□□□ 0.35
SLC1A1P43005 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC1A1P43005 AC116407.3-201ENST00000623905 1129 ntBASIC17.22■□□□□ 0.35
SLC1A1P43005 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC1A1P43005 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC1A1P43005 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC1A1P43005 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.22■□□□□ 0.35
SLC1A1P43005 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SLC1A1P43005 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC1A1P43005 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SLC1A1P43005 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC1A1P43005 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC1A1P43005 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC1A1P43005 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A1P43005 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC1A1P43005 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SLC1A1P43005 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A1P43005 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC1A1P43005 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC1A1P43005 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC1A1P43005 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SLC1A1P43005 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A1P43005 PAUPAR-201ENST00000630360 2965 ntBASIC17.21■□□□□ 0.35
SLC1A1P43005 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A1P43005 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A1P43005 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A1P43005 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC1A1P43005 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A1P43005 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC1A1P43005 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC1A1P43005 AL450487.1-201ENST00000426799 995 ntBASIC17.21■□□□□ 0.35
SLC1A1P43005 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC1A1P43005 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.21■□□□□ 0.35
SLC1A1P43005 HCG4B-203ENST00000450128 991 ntBASIC17.21■□□□□ 0.35
SLC1A1P43005 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A1P43005 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC1A1P43005 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
SLC1A1P43005 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.21■□□□□ 0.35
SLC1A1P43005 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC1A1P43005 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC1A1P43005 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A1P43005 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SLC1A1P43005 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A1P43005 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC1A1P43005 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A1P43005 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC1A1P43005 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A1P43005 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
SLC1A1P43005 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A1P43005 AC092919.2-201ENST00000623631 1645 ntBASIC17.21■□□□□ 0.35
SLC1A1P43005 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC1A1P43005 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
SLC1A1P43005 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SLC1A1P43005 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
SLC1A1P43005 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC1A1P43005 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SLC1A1P43005 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A1P43005 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC1A1P43005 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC1A1P43005 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC1A1P43005 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms