Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDE6BP35913 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDE6BP35913 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.06■□□□□ 0.8
PDE6BP35913 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PDE6BP35913 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDE6BP35913 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6BP35913 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6BP35913 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PDE6BP35913 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6BP35913 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
PDE6BP35913 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC20.05■□□□□ 0.8
PDE6BP35913 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6BP35913 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6BP35913 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6BP35913 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6BP35913 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6BP35913 APOC3-202ENST00000375345 604 ntTSL 5 BASIC20.05■□□□□ 0.8
PDE6BP35913 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6BP35913 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC20.05■□□□□ 0.8
PDE6BP35913 AL355994.2-201ENST00000447882 704 ntBASIC20.05■□□□□ 0.8
PDE6BP35913 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PDE6BP35913 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PDE6BP35913 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC20.05■□□□□ 0.8
PDE6BP35913 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC20.05■□□□□ 0.8
PDE6BP35913 AL365330.1-201ENST00000607459 531 ntBASIC20.05■□□□□ 0.8
PDE6BP35913 CU634019.7-201ENST00000624153 1185 ntBASIC20.05■□□□□ 0.8
PDE6BP35913 FP236241.2-201ENST00000624906 1185 ntBASIC20.05■□□□□ 0.8
PDE6BP35913 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6BP35913 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6BP35913 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6BP35913 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PDE6BP35913 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6BP35913 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6BP35913 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6BP35913 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6BP35913 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6BP35913 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6BP35913 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PDE6BP35913 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6BP35913 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6BP35913 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDE6BP35913 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDE6BP35913 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDE6BP35913 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDE6BP35913 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDE6BP35913 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDE6BP35913 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDE6BP35913 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDE6BP35913 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDE6BP35913 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PDE6BP35913 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.04■□□□□ 0.8
PDE6BP35913 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDE6BP35913 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDE6BP35913 AL645728.1-201ENST00000366221 2101 ntBASIC20.04■□□□□ 0.8
PDE6BP35913 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDE6BP35913 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC20.04■□□□□ 0.8
PDE6BP35913 HNRNPA1P13-201ENST00000510646 963 ntBASIC20.04■□□□□ 0.8
PDE6BP35913 RNA5SP412-201ENST00000516234 123 ntBASIC20.04■□□□□ 0.8
PDE6BP35913 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC20.04■□□□□ 0.8
PDE6BP35913 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC20.04■□□□□ 0.8
PDE6BP35913 MIR5189-201ENST00000577370 114 ntBASIC20.04■□□□□ 0.8
PDE6BP35913 MIR4321-201ENST00000592276 80 ntBASIC20.04■□□□□ 0.8
PDE6BP35913 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC20.04■□□□□ 0.8
PDE6BP35913 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.04■□□□□ 0.8
PDE6BP35913 AC005332.8-201ENST00000622750 2735 ntBASIC20.04■□□□□ 0.8
PDE6BP35913 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDE6BP35913 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.04■□□□□ 0.8
PDE6BP35913 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDE6BP35913 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDE6BP35913 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDE6BP35913 AC067852.2-201ENST00000590513 2313 ntBASIC20.04■□□□□ 0.8
PDE6BP35913 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDE6BP35913 GGT4P-201ENST00000623672 1708 ntBASIC20.04■□□□□ 0.8
PDE6BP35913 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.04■□□□□ 0.8
PDE6BP35913 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.04■□□□□ 0.8
PDE6BP35913 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PDE6BP35913 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDE6BP35913 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.03■□□□□ 0.8
PDE6BP35913 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6BP35913 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.03■□□□□ 0.8
PDE6BP35913 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.03■□□□□ 0.8
PDE6BP35913 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.03■□□□□ 0.8
PDE6BP35913 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.03■□□□□ 0.8
PDE6BP35913 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PDE6BP35913 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6BP35913 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6BP35913 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PDE6BP35913 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.03■□□□□ 0.8
PDE6BP35913 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PDE6BP35913 BRWD1P1-201ENST00000401091 371 ntBASIC20.03■□□□□ 0.8
PDE6BP35913 AC099336.1-201ENST00000417053 1171 ntBASIC20.03■□□□□ 0.8
PDE6BP35913 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC20.03■□□□□ 0.8
PDE6BP35913 CD74-212ENST00000524315 584 ntTSL 5 BASIC20.03■□□□□ 0.8
PDE6BP35913 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC20.03■□□□□ 0.8
PDE6BP35913 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC20.03■□□□□ 0.8
PDE6BP35913 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC20.03■□□□□ 0.8
PDE6BP35913 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6BP35913 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6BP35913 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6BP35913 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms