Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ABCD3P28288 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ABCD3P28288 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ABCD3P28288 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ABCD3P28288 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
ABCD3P28288 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ABCD3P28288 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.15■□□□□ 0.02
ABCD3P28288 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.15■□□□□ 0.02
ABCD3P28288 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ABCD3P28288 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ABCD3P28288 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ABCD3P28288 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.15■□□□□ 0.02
ABCD3P28288 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.15■□□□□ 0.02
ABCD3P28288 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ABCD3P28288 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.15■□□□□ 0.02
ABCD3P28288 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.15■□□□□ 0.02
ABCD3P28288 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.15■□□□□ 0.02
ABCD3P28288 POU5F1P6-201ENST00000466990 990 ntBASIC15.15■□□□□ 0.02
ABCD3P28288 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ABCD3P28288 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ABCD3P28288 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.15■□□□□ 0.02
ABCD3P28288 AC093520.2-201ENST00000561830 333 ntBASIC15.15■□□□□ 0.02
ABCD3P28288 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.15■□□□□ 0.02
ABCD3P28288 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
ABCD3P28288 AP000842.3-202ENST00000569238 1080 ntBASIC15.15■□□□□ 0.02
ABCD3P28288 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ABCD3P28288 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.15■□□□□ 0.02
ABCD3P28288 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.15■□□□□ 0.02
ABCD3P28288 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.15■□□□□ 0.02
ABCD3P28288 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ABCD3P28288 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ABCD3P28288 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ABCD3P28288 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ABCD3P28288 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.15■□□□□ 0.02
ABCD3P28288 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
ABCD3P28288 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ABCD3P28288 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ABCD3P28288 AL118508.1-201ENST00000613502 2345 ntBASIC15.15■□□□□ 0.02
ABCD3P28288 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ABCD3P28288 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ABCD3P28288 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
ABCD3P28288 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.15■□□□□ 0.02
ABCD3P28288 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ABCD3P28288 AC005622.1-201ENST00000636801 1703 ntBASIC15.14■□□□□ 0.01
ABCD3P28288 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.14■□□□□ 0.01
ABCD3P28288 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ABCD3P28288 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ABCD3P28288 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ABCD3P28288 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.14■□□□□ 0.01
ABCD3P28288 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.14■□□□□ 0.01
ABCD3P28288 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ABCD3P28288 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ABCD3P28288 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.14■□□□□ 0.01
ABCD3P28288 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ABCD3P28288 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.14■□□□□ 0.01
ABCD3P28288 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ABCD3P28288 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ABCD3P28288 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.14■□□□□ 0.01
ABCD3P28288 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ABCD3P28288 MIR346-201ENST00000362234 95 ntBASIC15.14■□□□□ 0.01
ABCD3P28288 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ABCD3P28288 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.14■□□□□ 0.01
ABCD3P28288 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ABCD3P28288 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.14■□□□□ 0.01
ABCD3P28288 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.14■□□□□ 0.01
ABCD3P28288 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.14■□□□□ 0.01
ABCD3P28288 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.14■□□□□ 0.01
ABCD3P28288 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.14■□□□□ 0.01
ABCD3P28288 AC023141.5-201ENST00000458585 616 ntBASIC15.14■□□□□ 0.01
ABCD3P28288 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.14■□□□□ 0.01
ABCD3P28288 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.14■□□□□ 0.01
ABCD3P28288 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.14■□□□□ 0.01
ABCD3P28288 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.14■□□□□ 0.01
ABCD3P28288 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.14■□□□□ 0.01
ABCD3P28288 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.14■□□□□ 0.01
ABCD3P28288 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.14■□□□□ 0.01
ABCD3P28288 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.14■□□□□ 0.01
ABCD3P28288 AC084121.4-201ENST00000641598 221 ntBASIC15.14■□□□□ 0.01
ABCD3P28288 AF228730.8-201ENST00000642140 221 ntBASIC15.14■□□□□ 0.01
ABCD3P28288 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.14■□□□□ 0.01
ABCD3P28288 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.14■□□□□ 0.01
ABCD3P28288 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.14■□□□□ 0.01
ABCD3P28288 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ABCD3P28288 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ABCD3P28288 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ABCD3P28288 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ABCD3P28288 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ABCD3P28288 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ABCD3P28288 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ABCD3P28288 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ABCD3P28288 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ABCD3P28288 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ABCD3P28288 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ABCD3P28288 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ABCD3P28288 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ABCD3P28288 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.14■□□□□ 0.01
ABCD3P28288 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.14■□□□□ 0.01
ABCD3P28288 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ABCD3P28288 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ABCD3P28288 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms