Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMLP26374 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.79■□□□□ 0.76
CHMLP26374 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHMLP26374 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMLP26374 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.79■□□□□ 0.76
CHMLP26374 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMLP26374 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHMLP26374 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMLP26374 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMLP26374 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CHMLP26374 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHMLP26374 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMLP26374 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMLP26374 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMLP26374 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.78■□□□□ 0.76
CHMLP26374 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMLP26374 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMLP26374 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMLP26374 MIR940-201ENST00000401276 94 ntBASIC19.78■□□□□ 0.76
CHMLP26374 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.78■□□□□ 0.76
CHMLP26374 AC112191.1-201ENST00000523689 701 ntBASIC19.78■□□□□ 0.76
CHMLP26374 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMLP26374 AC002347.1-201ENST00000569543 541 ntBASIC19.78■□□□□ 0.76
CHMLP26374 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.78■□□□□ 0.76
CHMLP26374 AL671883.3-201ENST00000603274 991 ntBASIC19.78■□□□□ 0.76
CHMLP26374 AC091812.2-201ENST00000619081 385 ntBASIC19.78■□□□□ 0.76
CHMLP26374 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.78■□□□□ 0.76
CHMLP26374 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.78■□□□□ 0.76
CHMLP26374 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMLP26374 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CHMLP26374 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMLP26374 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHMLP26374 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMLP26374 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHMLP26374 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHMLP26374 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.78■□□□□ 0.76
CHMLP26374 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMLP26374 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.78■□□□□ 0.76
CHMLP26374 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CHMLP26374 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHMLP26374 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CHMLP26374 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CHMLP26374 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.77■□□□□ 0.76
CHMLP26374 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CHMLP26374 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMLP26374 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CHMLP26374 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHMLP26374 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CHMLP26374 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CHMLP26374 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHMLP26374 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMLP26374 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.77■□□□□ 0.76
CHMLP26374 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.77■□□□□ 0.76
CHMLP26374 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHMLP26374 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.77■□□□□ 0.76
CHMLP26374 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHMLP26374 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.77■□□□□ 0.76
CHMLP26374 AC092902.6-201ENST00000641783 218 ntBASIC19.77■□□□□ 0.76
CHMLP26374 AC008677.1-201ENST00000519230 1561 ntBASIC19.77■□□□□ 0.76
CHMLP26374 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CHMLP26374 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.77■□□□□ 0.75
CHMLP26374 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CHMLP26374 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHMLP26374 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.77■□□□□ 0.75
CHMLP26374 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHMLP26374 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMLP26374 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMLP26374 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.76■□□□□ 0.75
CHMLP26374 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.76■□□□□ 0.75
CHMLP26374 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMLP26374 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.76■□□□□ 0.75
CHMLP26374 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMLP26374 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMLP26374 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
CHMLP26374 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMLP26374 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMLP26374 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.76■□□□□ 0.75
CHMLP26374 AL022342.1-201ENST00000400363 863 ntBASIC19.76■□□□□ 0.75
CHMLP26374 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.76■□□□□ 0.75
CHMLP26374 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.76■□□□□ 0.75
CHMLP26374 PRYP6-201ENST00000514804 343 ntBASIC19.76■□□□□ 0.75
CHMLP26374 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.76■□□□□ 0.75
CHMLP26374 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMLP26374 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CHMLP26374 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CHMLP26374 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMLP26374 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMLP26374 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMLP26374 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMLP26374 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMLP26374 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMLP26374 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMLP26374 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMLP26374 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMLP26374 FOXO1B-201ENST00000504678 1527 ntBASIC19.76■□□□□ 0.75
CHMLP26374 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.76■□□□□ 0.75
CHMLP26374 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMLP26374 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMLP26374 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMLP26374 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms