Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL1P22362 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL1P22362 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL1P22362 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL1P22362 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CCL1P22362 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL1P22362 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL1P22362 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL1P22362 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL1P22362 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL1P22362 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL1P22362 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL1P22362 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL1P22362 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CCL1P22362 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL1P22362 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL1P22362 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL1P22362 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL1P22362 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL1P22362 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CCL1P22362 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL1P22362 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL1P22362 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL1P22362 AC092384.3-202ENST00000564646 2873 ntBASIC14.13□□□□□ -0.15
CCL1P22362 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL1P22362 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL1P22362 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL1P22362 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL1P22362 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CCL1P22362 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL1P22362 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL1P22362 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL1P22362 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL1P22362 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL1P22362 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CCL1P22362 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL1P22362 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL1P22362 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL1P22362 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL1P22362 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL1P22362 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL1P22362 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL1P22362 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CCL1P22362 HAUS4P1-201ENST00000406739 1145 ntBASIC14.13□□□□□ -0.15
CCL1P22362 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL1P22362 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL1P22362 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CCL1P22362 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL1P22362 AC093909.1-201ENST00000504731 1122 ntBASIC14.13□□□□□ -0.15
CCL1P22362 RNA5SP415-201ENST00000517246 115 ntBASIC14.13□□□□□ -0.15
CCL1P22362 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.13□□□□□ -0.15
CCL1P22362 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CCL1P22362 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.13□□□□□ -0.15
CCL1P22362 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.13□□□□□ -0.15
CCL1P22362 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.13□□□□□ -0.15
CCL1P22362 AL365330.1-201ENST00000607459 531 ntBASIC14.13□□□□□ -0.15
CCL1P22362 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
CCL1P22362 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL1P22362 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL1P22362 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL1P22362 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CCL1P22362 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CCL1P22362 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL1P22362 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL1P22362 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL1P22362 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL1P22362 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL1P22362 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL1P22362 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL1P22362 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CCL1P22362 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL1P22362 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL1P22362 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL1P22362 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
CCL1P22362 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL1P22362 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL1P22362 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CCL1P22362 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
CCL1P22362 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL1P22362 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL1P22362 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL1P22362 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CCL1P22362 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CCL1P22362 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL1P22362 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL1P22362 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL1P22362 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.12□□□□□ -0.15
CCL1P22362 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
CCL1P22362 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL1P22362 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL1P22362 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL1P22362 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.12□□□□□ -0.15
CCL1P22362 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL1P22362 AL450487.1-201ENST00000426799 995 ntBASIC14.12□□□□□ -0.15
CCL1P22362 AC140658.5-201ENST00000438532 169 ntBASIC14.12□□□□□ -0.15
CCL1P22362 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL1P22362 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.12□□□□□ -0.15
CCL1P22362 AC079776.4-201ENST00000511039 504 ntBASIC14.12□□□□□ -0.15
CCL1P22362 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL1P22362 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms