Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TNFRSF1BP20333 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.33■□□□□ 0.04
TNFRSF1BP20333 AC112504.1-201ENST00000623415 1841 ntBASIC15.33■□□□□ 0.04
TNFRSF1BP20333 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TNFRSF1BP20333 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TNFRSF1BP20333 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TNFRSF1BP20333 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.33■□□□□ 0.04
TNFRSF1BP20333 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
TNFRSF1BP20333 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TNFRSF1BP20333 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TNFRSF1BP20333 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TNFRSF1BP20333 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TNFRSF1BP20333 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TNFRSF1BP20333 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.33■□□□□ 0.04
TNFRSF1BP20333 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.33■□□□□ 0.04
TNFRSF1BP20333 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TNFRSF1BP20333 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TNFRSF1BP20333 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TNFRSF1BP20333 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.33■□□□□ 0.04
TNFRSF1BP20333 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 AC023824.1-201ENST00000562945 2975 ntBASIC15.32■□□□□ 0.04
TNFRSF1BP20333 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 POU5F1P6-201ENST00000466990 990 ntBASIC15.32■□□□□ 0.04
TNFRSF1BP20333 RPS15P9-201ENST00000494093 319 ntBASIC15.32■□□□□ 0.04
TNFRSF1BP20333 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 AF238378.1-201ENST00000526806 358 ntBASIC15.32■□□□□ 0.04
TNFRSF1BP20333 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 AC087641.1-201ENST00000557561 1021 ntBASIC15.32■□□□□ 0.04
TNFRSF1BP20333 AC091304.2-201ENST00000564639 760 ntBASIC15.32■□□□□ 0.04
TNFRSF1BP20333 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TNFRSF1BP20333 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 SCARNA2-201ENST00000458748 420 ntBASIC15.31■□□□□ 0.04
TNFRSF1BP20333 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms