Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYN1P17600 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.69■□□□□ 0.42
SYN1P17600 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.69■□□□□ 0.42
SYN1P17600 AC079316.1-201ENST00000548397 411 ntBASIC17.69■□□□□ 0.42
SYN1P17600 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.69■□□□□ 0.42
SYN1P17600 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYN1P17600 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYN1P17600 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SYN1P17600 AL607033.1-201ENST00000623900 1599 ntBASIC17.69■□□□□ 0.42
SYN1P17600 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYN1P17600 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYN1P17600 MSTO2P-201ENST00000314835 1709 ntBASIC17.69■□□□□ 0.42
SYN1P17600 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYN1P17600 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYN1P17600 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYN1P17600 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.69■□□□□ 0.42
SYN1P17600 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.69■□□□□ 0.42
SYN1P17600 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SYN1P17600 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SYN1P17600 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.68■□□□□ 0.42
SYN1P17600 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.68■□□□□ 0.42
SYN1P17600 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 HIST3H2BA-201ENST00000436555 524 ntBASIC17.68■□□□□ 0.42
SYN1P17600 LDHBP1-201ENST00000455730 1119 ntBASIC17.68■□□□□ 0.42
SYN1P17600 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.68■□□□□ 0.42
SYN1P17600 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.68■□□□□ 0.42
SYN1P17600 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SYN1P17600 MIR4722-201ENST00000578292 60 ntBASIC17.68■□□□□ 0.42
SYN1P17600 MIR4706-201ENST00000582134 82 ntBASIC17.68■□□□□ 0.42
SYN1P17600 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.68■□□□□ 0.42
SYN1P17600 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.68■□□□□ 0.42
SYN1P17600 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.68■□□□□ 0.42
SYN1P17600 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SYN1P17600 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 AC006277.1-201ENST00000624348 1610 ntBASIC17.68■□□□□ 0.42
SYN1P17600 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.68■□□□□ 0.42
SYN1P17600 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.68■□□□□ 0.42
SYN1P17600 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYN1P17600 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.67■□□□□ 0.42
SYN1P17600 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 NUS1P3-201ENST00000423502 862 ntBASIC17.67■□□□□ 0.42
SYN1P17600 AC005077.2-201ENST00000449786 690 ntBASIC17.67■□□□□ 0.42
SYN1P17600 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.67■□□□□ 0.42
SYN1P17600 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.67■□□□□ 0.42
SYN1P17600 AC106760.1-201ENST00000508690 800 ntBASIC17.67■□□□□ 0.42
SYN1P17600 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.67■□□□□ 0.42
SYN1P17600 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.67■□□□□ 0.42
SYN1P17600 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.67■□□□□ 0.42
SYN1P17600 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.67■□□□□ 0.42
SYN1P17600 DUX4L45-201ENST00000566406 1057 ntBASIC17.67■□□□□ 0.42
SYN1P17600 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.67■□□□□ 0.42
SYN1P17600 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.67■□□□□ 0.42
SYN1P17600 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SYN1P17600 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.67■□□□□ 0.42
SYN1P17600 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.67■□□□□ 0.42
SYN1P17600 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.67■□□□□ 0.42
SYN1P17600 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYN1P17600 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.66■□□□□ 0.42
SYN1P17600 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SYN1P17600 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms