Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PDGFRAP16234 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDGFRAP16234 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.26■□□□□ 0.35
PDGFRAP16234 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFRAP16234 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
PDGFRAP16234 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFRAP16234 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFRAP16234 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFRAP16234 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
PDGFRAP16234 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFRAP16234 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.26■□□□□ 0.35
PDGFRAP16234 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.26■□□□□ 0.35
PDGFRAP16234 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFRAP16234 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.26■□□□□ 0.35
PDGFRAP16234 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFRAP16234 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFRAP16234 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
PDGFRAP16234 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFRAP16234 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PDGFRAP16234 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.26■□□□□ 0.35
PDGFRAP16234 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.26■□□□□ 0.35
PDGFRAP16234 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFRAP16234 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PDGFRAP16234 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.26■□□□□ 0.35
PDGFRAP16234 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.26■□□□□ 0.35
PDGFRAP16234 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFRAP16234 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.26■□□□□ 0.35
PDGFRAP16234 AC211486.1-202ENST00000416371 468 ntBASIC17.26■□□□□ 0.35
PDGFRAP16234 MKNK2P1-201ENST00000437526 628 ntBASIC17.26■□□□□ 0.35
PDGFRAP16234 AC211476.1-201ENST00000503899 468 ntBASIC17.26■□□□□ 0.35
PDGFRAP16234 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.26■□□□□ 0.35
PDGFRAP16234 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.26■□□□□ 0.35
PDGFRAP16234 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFRAP16234 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PDGFRAP16234 WASH6P-202ENST00000359512 1437 ntBASIC17.26■□□□□ 0.35
PDGFRAP16234 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.26■□□□□ 0.35
PDGFRAP16234 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFRAP16234 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFRAP16234 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFRAP16234 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDGFRAP16234 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
PDGFRAP16234 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PDGFRAP16234 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PDGFRAP16234 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.25■□□□□ 0.35
PDGFRAP16234 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 REXO1L8P-201ENST00000604378 1897 ntBASIC17.25■□□□□ 0.35
PDGFRAP16234 MTHFR-217ENST00000641820 1569 ntBASIC17.25■□□□□ 0.35
PDGFRAP16234 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.25■□□□□ 0.35
PDGFRAP16234 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
PDGFRAP16234 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 CEND1P1-201ENST00000451006 455 ntBASIC17.25■□□□□ 0.35
PDGFRAP16234 AC004967.1-201ENST00000453589 447 ntBASIC17.25■□□□□ 0.35
PDGFRAP16234 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.25■□□□□ 0.35
PDGFRAP16234 YBX1P5-201ENST00000509441 847 ntBASIC17.25■□□□□ 0.35
PDGFRAP16234 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.25■□□□□ 0.35
PDGFRAP16234 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
PDGFRAP16234 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.25■□□□□ 0.35
PDGFRAP16234 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.25■□□□□ 0.35
PDGFRAP16234 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
PDGFRAP16234 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PDGFRAP16234 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDGFRAP16234 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.25■□□□□ 0.35
PDGFRAP16234 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.24■□□□□ 0.35
PDGFRAP16234 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFRAP16234 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.24■□□□□ 0.35
PDGFRAP16234 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFRAP16234 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.24■□□□□ 0.35
PDGFRAP16234 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFRAP16234 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PDGFRAP16234 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFRAP16234 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFRAP16234 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFRAP16234 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PDGFRAP16234 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.24■□□□□ 0.35
PDGFRAP16234 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.24■□□□□ 0.35
PDGFRAP16234 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFRAP16234 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.24■□□□□ 0.35
PDGFRAP16234 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDGFRAP16234 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.24■□□□□ 0.35
PDGFRAP16234 ELL2P1-201ENST00000413990 1906 ntBASIC17.24■□□□□ 0.35
PDGFRAP16234 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms