Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BMP4P12644 STK33P1-201ENST00000423835 1218 ntBASIC15.17■□□□□ 0.02
BMP4P12644 PMS2P1-201ENST00000431037 1228 ntBASIC15.17■□□□□ 0.02
BMP4P12644 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BMP4P12644 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.17■□□□□ 0.02
BMP4P12644 FGFR3P6-201ENST00000457012 610 ntBASIC15.17■□□□□ 0.02
BMP4P12644 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.17■□□□□ 0.02
BMP4P12644 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
BMP4P12644 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.17■□□□□ 0.02
BMP4P12644 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.17■□□□□ 0.02
BMP4P12644 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.17■□□□□ 0.02
BMP4P12644 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BMP4P12644 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BMP4P12644 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.17■□□□□ 0.02
BMP4P12644 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
BMP4P12644 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.17■□□□□ 0.02
BMP4P12644 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.17■□□□□ 0.02
BMP4P12644 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BMP4P12644 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.17■□□□□ 0.02
BMP4P12644 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.17■□□□□ 0.02
BMP4P12644 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.17■□□□□ 0.02
BMP4P12644 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BMP4P12644 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BMP4P12644 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
BMP4P12644 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
BMP4P12644 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BMP4P12644 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
BMP4P12644 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.17■□□□□ 0.02
BMP4P12644 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
BMP4P12644 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BMP4P12644 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BMP4P12644 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BMP4P12644 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BMP4P12644 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.16■□□□□ 0.02
BMP4P12644 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
BMP4P12644 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.16■□□□□ 0.02
BMP4P12644 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
BMP4P12644 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
BMP4P12644 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.16■□□□□ 0.02
BMP4P12644 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BMP4P12644 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BMP4P12644 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BMP4P12644 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
BMP4P12644 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BMP4P12644 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BMP4P12644 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.16■□□□□ 0.02
BMP4P12644 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.16■□□□□ 0.02
BMP4P12644 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.16■□□□□ 0.02
BMP4P12644 PPT1-215ENST00000641471 2368 ntBASIC15.16■□□□□ 0.02
BMP4P12644 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BMP4P12644 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BMP4P12644 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.16■□□□□ 0.02
BMP4P12644 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.16■□□□□ 0.02
BMP4P12644 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.16■□□□□ 0.02
BMP4P12644 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
BMP4P12644 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BMP4P12644 AP001269.4-201ENST00000609611 512 ntBASIC15.16■□□□□ 0.02
BMP4P12644 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.16■□□□□ 0.02
BMP4P12644 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
BMP4P12644 TP73-AS1-207ENST00000624167 988 ntBASIC15.16■□□□□ 0.02
BMP4P12644 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
BMP4P12644 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.16■□□□□ 0.02
BMP4P12644 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BMP4P12644 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BMP4P12644 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
BMP4P12644 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
BMP4P12644 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BMP4P12644 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.16■□□□□ 0.02
BMP4P12644 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BMP4P12644 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.16■□□□□ 0.02
BMP4P12644 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.16■□□□□ 0.02
BMP4P12644 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.16■□□□□ 0.02
BMP4P12644 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BMP4P12644 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BMP4P12644 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.15■□□□□ 0.02
BMP4P12644 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.15■□□□□ 0.02
BMP4P12644 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
BMP4P12644 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BMP4P12644 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.15■□□□□ 0.02
BMP4P12644 ZNF259P1-201ENST00000407656 1365 ntBASIC15.15■□□□□ 0.02
BMP4P12644 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.15■□□□□ 0.02
BMP4P12644 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BMP4P12644 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
BMP4P12644 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
BMP4P12644 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.15■□□□□ 0.02
BMP4P12644 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BMP4P12644 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
BMP4P12644 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
BMP4P12644 AC122714.2-201ENST00000502787 707 ntBASIC15.15■□□□□ 0.02
BMP4P12644 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
BMP4P12644 AC139887.3-201ENST00000568585 713 ntBASIC15.15■□□□□ 0.02
BMP4P12644 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.15■□□□□ 0.02
BMP4P12644 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.15■□□□□ 0.02
BMP4P12644 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.15■□□□□ 0.02
BMP4P12644 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
BMP4P12644 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
BMP4P12644 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
BMP4P12644 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
BMP4P12644 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
BMP4P12644 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms