Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.51■□□□□ 0.23
MMP2P08253 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
MMP2P08253 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MMP2P08253 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.51■□□□□ 0.23
MMP2P08253 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MMP2P08253 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP2P08253 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP2P08253 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP2P08253 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP2P08253 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
MMP2P08253 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
MMP2P08253 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
MMP2P08253 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP2P08253 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
MMP2P08253 PCDHA1-201ENST00000378133 2726 ntBASIC16.5■□□□□ 0.23
MMP2P08253 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.5■□□□□ 0.23
MMP2P08253 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
MMP2P08253 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
MMP2P08253 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP2P08253 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP2P08253 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.5■□□□□ 0.23
MMP2P08253 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.5■□□□□ 0.23
MMP2P08253 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MMP2P08253 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.5■□□□□ 0.23
MMP2P08253 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP2P08253 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MMP2P08253 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.5■□□□□ 0.23
MMP2P08253 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
MMP2P08253 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MMP2P08253 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
MMP2P08253 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.5■□□□□ 0.23
MMP2P08253 AP000344.2-201ENST00000512987 629 ntBASIC16.5■□□□□ 0.23
MMP2P08253 SLC25A39P2-201ENST00000537614 270 ntBASIC16.5■□□□□ 0.23
MMP2P08253 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.5■□□□□ 0.23
MMP2P08253 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MMP2P08253 AC134684.3-201ENST00000641758 218 ntBASIC16.5■□□□□ 0.23
MMP2P08253 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP2P08253 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP2P08253 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
MMP2P08253 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP2P08253 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.5■□□□□ 0.23
MMP2P08253 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP2P08253 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
MMP2P08253 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP2P08253 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP2P08253 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
MMP2P08253 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP2P08253 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP2P08253 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP2P08253 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP2P08253 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP2P08253 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP2P08253 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
MMP2P08253 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP2P08253 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
MMP2P08253 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP2P08253 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP2P08253 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
MMP2P08253 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP2P08253 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP2P08253 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP2P08253 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MMP2P08253 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.49■□□□□ 0.23
MMP2P08253 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP2P08253 AL627223.1-201ENST00000416693 442 ntBASIC16.49■□□□□ 0.23
MMP2P08253 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP2P08253 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP2P08253 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP2P08253 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP2P08253 AP006288.1-201ENST00000446065 395 ntBASIC16.49■□□□□ 0.23
MMP2P08253 IGHV3-62-201ENST00000520057 340 ntBASIC16.49■□□□□ 0.23
MMP2P08253 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.49■□□□□ 0.23
MMP2P08253 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.49■□□□□ 0.23
MMP2P08253 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
MMP2P08253 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP2P08253 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
MMP2P08253 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.49■□□□□ 0.23
MMP2P08253 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP2P08253 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.49■□□□□ 0.23
MMP2P08253 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MMP2P08253 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
MMP2P08253 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP2P08253 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP2P08253 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
MMP2P08253 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.48■□□□□ 0.23
MMP2P08253 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MMP2P08253 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
MMP2P08253 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MMP2P08253 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP2P08253 AC024909.3-201ENST00000611513 2257 ntBASIC16.48■□□□□ 0.23
MMP2P08253 AL603832.2-201ENST00000566195 2125 ntBASIC16.48■□□□□ 0.23
MMP2P08253 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.48■□□□□ 0.23
MMP2P08253 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MMP2P08253 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP2P08253 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP2P08253 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
MMP2P08253 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP2P08253 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.48■□□□□ 0.23
MMP2P08253 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.48■□□□□ 0.23
MMP2P08253 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms