Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.44■□□□□ 0.06
PDGFAP04085 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 MIR346-201ENST00000362234 95 ntBASIC15.44■□□□□ 0.06
PDGFAP04085 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.44■□□□□ 0.06
PDGFAP04085 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.44■□□□□ 0.06
PDGFAP04085 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.44■□□□□ 0.06
PDGFAP04085 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PDGFAP04085 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PDGFAP04085 AC008267.7-201ENST00000624570 1194 ntBASIC15.44■□□□□ 0.06
PDGFAP04085 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
PDGFAP04085 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.44■□□□□ 0.06
PDGFAP04085 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
PDGFAP04085 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PDGFAP04085 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.44■□□□□ 0.06
PDGFAP04085 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PDGFAP04085 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.44■□□□□ 0.06
PDGFAP04085 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PDGFAP04085 SLC22A20-204ENST00000530038 1673 ntBASIC15.44■□□□□ 0.06
PDGFAP04085 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.44■□□□□ 0.06
PDGFAP04085 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
PDGFAP04085 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.44■□□□□ 0.06
PDGFAP04085 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.44■□□□□ 0.06
PDGFAP04085 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.44■□□□□ 0.06
PDGFAP04085 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PDGFAP04085 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDGFAP04085 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.43■□□□□ 0.06
PDGFAP04085 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PDGFAP04085 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
PDGFAP04085 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFAP04085 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFAP04085 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFAP04085 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFAP04085 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFAP04085 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.43■□□□□ 0.06
PDGFAP04085 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFAP04085 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFAP04085 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.43■□□□□ 0.06
PDGFAP04085 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
PDGFAP04085 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFAP04085 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
PDGFAP04085 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFAP04085 RNU1-129P-201ENST00000384064 167 ntBASIC15.43■□□□□ 0.06
PDGFAP04085 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.43■□□□□ 0.06
PDGFAP04085 AC007274.1-201ENST00000439805 662 ntBASIC15.43■□□□□ 0.06
PDGFAP04085 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.43■□□□□ 0.06
PDGFAP04085 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFAP04085 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.43■□□□□ 0.06
PDGFAP04085 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFAP04085 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.43■□□□□ 0.06
PDGFAP04085 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.43■□□□□ 0.06
PDGFAP04085 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFAP04085 U1.21-201ENST00000580816 167 ntBASIC15.43■□□□□ 0.06
PDGFAP04085 AL353732.1-201ENST00000569618 1459 ntBASIC15.43■□□□□ 0.06
PDGFAP04085 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFAP04085 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.43■□□□□ 0.06
PDGFAP04085 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFAP04085 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.43■□□□□ 0.06
PDGFAP04085 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.43■□□□□ 0.06
PDGFAP04085 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.43■□□□□ 0.06
PDGFAP04085 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
PDGFAP04085 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFAP04085 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFAP04085 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFAP04085 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFAP04085 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFAP04085 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.43■□□□□ 0.06
PDGFAP04085 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDGFAP04085 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
PDGFAP04085 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PDGFAP04085 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.43■□□□□ 0.06
PDGFAP04085 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.43■□□□□ 0.06
PDGFAP04085 TSPY26P-202ENST00000565928 3884 ntBASIC15.43■□□□□ 0.06
PDGFAP04085 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.42■□□□□ 0.06
PDGFAP04085 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFAP04085 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFAP04085 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFAP04085 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.42■□□□□ 0.06
PDGFAP04085 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFAP04085 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PDGFAP04085 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFAP04085 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
PDGFAP04085 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFAP04085 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.42■□□□□ 0.06
PDGFAP04085 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.42■□□□□ 0.06
PDGFAP04085 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDGFAP04085 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.42■□□□□ 0.06
PDGFAP04085 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms