Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.26■□□□□ 0.35
APOEP02649 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
APOEP02649 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
APOEP02649 SPDYE11-202ENST00000450699 704 ntBASIC17.26■□□□□ 0.35
APOEP02649 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.26■□□□□ 0.35
APOEP02649 SPDYE9P-201ENST00000570642 692 ntBASIC17.26■□□□□ 0.35
APOEP02649 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.26■□□□□ 0.35
APOEP02649 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.26■□□□□ 0.35
APOEP02649 SPDYE10P-202ENST00000612005 668 ntBASIC17.26■□□□□ 0.35
APOEP02649 SPDYE8P-202ENST00000612377 668 ntBASIC17.26■□□□□ 0.35
APOEP02649 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
APOEP02649 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.26■□□□□ 0.35
APOEP02649 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOEP02649 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.26■□□□□ 0.35
APOEP02649 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
APOEP02649 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOEP02649 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOEP02649 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.26■□□□□ 0.35
APOEP02649 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOEP02649 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOEP02649 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
APOEP02649 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.26■□□□□ 0.35
APOEP02649 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOEP02649 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
APOEP02649 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOEP02649 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.25■□□□□ 0.35
APOEP02649 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
APOEP02649 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOEP02649 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOEP02649 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APOEP02649 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOEP02649 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOEP02649 HLA-A-202ENST00000376806 1854 ntBASIC17.25■□□□□ 0.35
APOEP02649 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APOEP02649 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOEP02649 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOEP02649 TFAMP1-201ENST00000412727 736 ntBASIC17.25■□□□□ 0.35
APOEP02649 RPS8P6-201ENST00000426177 609 ntBASIC17.25■□□□□ 0.35
APOEP02649 ADH5P3-201ENST00000433842 1137 ntBASIC17.25■□□□□ 0.35
APOEP02649 AP006288.1-201ENST00000446065 395 ntBASIC17.25■□□□□ 0.35
APOEP02649 TIMM8BP1-201ENST00000452384 211 ntBASIC17.25■□□□□ 0.35
APOEP02649 KRT18P34-201ENST00000488218 1270 ntBASIC17.25■□□□□ 0.35
APOEP02649 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.25■□□□□ 0.35
APOEP02649 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.25■□□□□ 0.35
APOEP02649 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APOEP02649 AL135744.1-201ENST00000565098 629 ntBASIC17.25■□□□□ 0.35
APOEP02649 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.25■□□□□ 0.35
APOEP02649 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APOEP02649 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.25■□□□□ 0.35
APOEP02649 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APOEP02649 AC026120.1-201ENST00000611536 926 ntBASIC17.25■□□□□ 0.35
APOEP02649 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APOEP02649 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOEP02649 AC016027.1-202ENST00000607927 1699 ntBASIC17.25■□□□□ 0.35
APOEP02649 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.25■□□□□ 0.35
APOEP02649 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOEP02649 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOEP02649 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOEP02649 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.25■□□□□ 0.35
APOEP02649 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOEP02649 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
APOEP02649 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOEP02649 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
APOEP02649 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
APOEP02649 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOEP02649 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
APOEP02649 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOEP02649 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
APOEP02649 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.24■□□□□ 0.35
APOEP02649 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOEP02649 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOEP02649 AC079328.2-201ENST00000561241 3354 ntBASIC17.24■□□□□ 0.35
APOEP02649 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APOEP02649 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOEP02649 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APOEP02649 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOEP02649 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOEP02649 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
APOEP02649 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.24■□□□□ 0.35
APOEP02649 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOEP02649 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
APOEP02649 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.24■□□□□ 0.35
APOEP02649 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.24■□□□□ 0.35
APOEP02649 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOEP02649 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.24■□□□□ 0.35
APOEP02649 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.24■□□□□ 0.35
APOEP02649 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.24■□□□□ 0.35
APOEP02649 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
APOEP02649 SNHG9-202ENST00000564014 471 ntBASIC17.24■□□□□ 0.35
APOEP02649 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
APOEP02649 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.24■□□□□ 0.35
APOEP02649 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.24■□□□□ 0.35
APOEP02649 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
APOEP02649 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOEP02649 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
APOEP02649 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
APOEP02649 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
APOEP02649 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
APOEP02649 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.24■□□□□ 0.35
APOEP02649 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms