Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMNAP02545 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMNAP02545 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
LMNAP02545 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMNAP02545 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMNAP02545 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LMNAP02545 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LMNAP02545 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.26■□□□□ 0.35
LMNAP02545 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LMNAP02545 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.26■□□□□ 0.35
LMNAP02545 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LMNAP02545 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LMNAP02545 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LMNAP02545 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMNAP02545 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMNAP02545 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LMNAP02545 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.25■□□□□ 0.35
LMNAP02545 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LMNAP02545 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LMNAP02545 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMNAP02545 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMNAP02545 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LMNAP02545 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LMNAP02545 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMNAP02545 PI4KAP1-204ENST00000612579 1703 ntBASIC17.25■□□□□ 0.35
LMNAP02545 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
LMNAP02545 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMNAP02545 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.25■□□□□ 0.35
LMNAP02545 AL513480.1-201ENST00000451731 511 ntBASIC17.25■□□□□ 0.35
LMNAP02545 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LMNAP02545 RN7SL589P-201ENST00000481268 310 ntBASIC17.25■□□□□ 0.35
LMNAP02545 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LMNAP02545 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMNAP02545 AL158211.3-201ENST00000607385 239 ntBASIC17.25■□□□□ 0.35
LMNAP02545 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.25■□□□□ 0.35
LMNAP02545 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LMNAP02545 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LMNAP02545 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMNAP02545 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMNAP02545 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.25■□□□□ 0.35
LMNAP02545 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.25■□□□□ 0.35
LMNAP02545 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMNAP02545 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LMNAP02545 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LMNAP02545 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LMNAP02545 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.25■□□□□ 0.35
LMNAP02545 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMNAP02545 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMNAP02545 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMNAP02545 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LMNAP02545 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LMNAP02545 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMNAP02545 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMNAP02545 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMNAP02545 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LMNAP02545 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.24■□□□□ 0.35
LMNAP02545 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMNAP02545 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.24■□□□□ 0.35
LMNAP02545 AL049757.1-201ENST00000616842 1596 ntBASIC17.24■□□□□ 0.35
LMNAP02545 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMNAP02545 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LMNAP02545 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LMNAP02545 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.24■□□□□ 0.35
LMNAP02545 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LMNAP02545 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.24■□□□□ 0.35
LMNAP02545 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMNAP02545 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
LMNAP02545 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LMNAP02545 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LMNAP02545 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.24■□□□□ 0.35
LMNAP02545 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LMNAP02545 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.24■□□□□ 0.35
LMNAP02545 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.24■□□□□ 0.35
LMNAP02545 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.24■□□□□ 0.35
LMNAP02545 FAM185BP-201ENST00000443595 716 ntBASIC17.24■□□□□ 0.35
LMNAP02545 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.24■□□□□ 0.35
LMNAP02545 GPR53P-205ENST00000457298 1084 ntBASIC17.24■□□□□ 0.35
LMNAP02545 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.24■□□□□ 0.35
LMNAP02545 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.24■□□□□ 0.35
LMNAP02545 IGHV3-71-201ENST00000523324 359 ntBASIC17.24■□□□□ 0.35
LMNAP02545 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.24■□□□□ 0.35
LMNAP02545 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.24■□□□□ 0.35
LMNAP02545 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMNAP02545 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.24■□□□□ 0.35
LMNAP02545 AC084346.2-201ENST00000607097 949 ntBASIC17.24■□□□□ 0.35
LMNAP02545 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LMNAP02545 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.24■□□□□ 0.35
LMNAP02545 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.24■□□□□ 0.35
LMNAP02545 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.24■□□□□ 0.35
LMNAP02545 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMNAP02545 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMNAP02545 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMNAP02545 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMNAP02545 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.24■□□□□ 0.35
LMNAP02545 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LMNAP02545 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LMNAP02545 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMNAP02545 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LMNAP02545 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LMNAP02545 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms