Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KRT6AP02538 MIR4515-201ENST00000584082 81 ntBASIC15.99■□□□□ 0.15
KRT6AP02538 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.99■□□□□ 0.15
KRT6AP02538 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KRT6AP02538 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT6AP02538 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT6AP02538 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
KRT6AP02538 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
KRT6AP02538 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT6AP02538 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.99■□□□□ 0.15
KRT6AP02538 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT6AP02538 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
KRT6AP02538 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KRT6AP02538 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
KRT6AP02538 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT6AP02538 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT6AP02538 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.98■□□□□ 0.15
KRT6AP02538 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.98■□□□□ 0.15
KRT6AP02538 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT6AP02538 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KRT6AP02538 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT6AP02538 AC007326.2-201ENST00000624224 7579 ntBASIC15.98■□□□□ 0.15
KRT6AP02538 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
KRT6AP02538 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
KRT6AP02538 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.98■□□□□ 0.15
KRT6AP02538 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KRT6AP02538 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT6AP02538 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT6AP02538 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
KRT6AP02538 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT6AP02538 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT6AP02538 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.98■□□□□ 0.15
KRT6AP02538 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.98■□□□□ 0.15
KRT6AP02538 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT6AP02538 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT6AP02538 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT6AP02538 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.98■□□□□ 0.15
KRT6AP02538 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.98■□□□□ 0.15
KRT6AP02538 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.98■□□□□ 0.15
KRT6AP02538 RN7SL510P-201ENST00000581311 263 ntBASIC15.98■□□□□ 0.15
KRT6AP02538 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.98■□□□□ 0.15
KRT6AP02538 AL773604.1-201ENST00000617417 272 ntBASIC15.98■□□□□ 0.15
KRT6AP02538 AC148477.8-201ENST00000624298 468 ntBASIC15.98■□□□□ 0.15
KRT6AP02538 AC117500.6-201ENST00000624871 588 ntBASIC15.98■□□□□ 0.15
KRT6AP02538 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.98■□□□□ 0.15
KRT6AP02538 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KRT6AP02538 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT6AP02538 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.98■□□□□ 0.15
KRT6AP02538 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
KRT6AP02538 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.98■□□□□ 0.15
KRT6AP02538 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.98■□□□□ 0.15
KRT6AP02538 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
KRT6AP02538 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT6AP02538 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.98■□□□□ 0.15
KRT6AP02538 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KRT6AP02538 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.98■□□□□ 0.15
KRT6AP02538 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.98■□□□□ 0.15
KRT6AP02538 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
KRT6AP02538 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
KRT6AP02538 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KRT6AP02538 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT6AP02538 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.97■□□□□ 0.15
KRT6AP02538 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
KRT6AP02538 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT6AP02538 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT6AP02538 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT6AP02538 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT6AP02538 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
KRT6AP02538 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT6AP02538 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.97■□□□□ 0.15
KRT6AP02538 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT6AP02538 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
KRT6AP02538 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.97■□□□□ 0.15
KRT6AP02538 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.97■□□□□ 0.15
KRT6AP02538 AC079781.3-201ENST00000449110 356 ntBASIC15.97■□□□□ 0.15
KRT6AP02538 AC092910.1-201ENST00000482027 1129 ntBASIC15.97■□□□□ 0.15
KRT6AP02538 CXCL1P1-201ENST00000502804 216 ntBASIC15.97■□□□□ 0.15
KRT6AP02538 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.97■□□□□ 0.15
KRT6AP02538 MIR4751-201ENST00000578027 74 ntBASIC15.97■□□□□ 0.15
KRT6AP02538 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
KRT6AP02538 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.97■□□□□ 0.15
KRT6AP02538 AC021097.1-201ENST00000607902 574 ntBASIC15.97■□□□□ 0.15
KRT6AP02538 ACTL9-202ENST00000612068 1252 ntBASIC15.97■□□□□ 0.15
KRT6AP02538 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.97■□□□□ 0.15
KRT6AP02538 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KRT6AP02538 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT6AP02538 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.97■□□□□ 0.15
KRT6AP02538 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT6AP02538 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KRT6AP02538 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.97■□□□□ 0.15
KRT6AP02538 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
KRT6AP02538 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT6AP02538 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
KRT6AP02538 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT6AP02538 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KRT6AP02538 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KRT6AP02538 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
KRT6AP02538 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.97■□□□□ 0.15
KRT6AP02538 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
KRT6AP02538 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms