Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.55■□□□□ 0.72
COL1A1P02452 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.55■□□□□ 0.72
COL1A1P02452 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A1P02452 MIR1909-201ENST00000411312 80 ntBASIC19.55■□□□□ 0.72
COL1A1P02452 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.55■□□□□ 0.72
COL1A1P02452 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.55■□□□□ 0.72
COL1A1P02452 AC011495.1-201ENST00000498085 584 ntBASIC19.55■□□□□ 0.72
COL1A1P02452 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.55■□□□□ 0.72
COL1A1P02452 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.55■□□□□ 0.72
COL1A1P02452 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.55■□□□□ 0.72
COL1A1P02452 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
COL1A1P02452 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC19.55■□□□□ 0.72
COL1A1P02452 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.55■□□□□ 0.72
COL1A1P02452 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.55■□□□□ 0.72
COL1A1P02452 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A1P02452 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A1P02452 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.55■□□□□ 0.72
COL1A1P02452 AC007431.3-201ENST00000623221 587 ntBASIC19.55■□□□□ 0.72
COL1A1P02452 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A1P02452 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.55■□□□□ 0.72
COL1A1P02452 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A1P02452 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A1P02452 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
COL1A1P02452 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.55■□□□□ 0.72
COL1A1P02452 SLC7A15P-201ENST00000424028 1363 ntBASIC19.55■□□□□ 0.72
COL1A1P02452 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A1P02452 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A1P02452 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.55■□□□□ 0.72
COL1A1P02452 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A1P02452 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A1P02452 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
COL1A1P02452 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.55■□□□□ 0.72
COL1A1P02452 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A1P02452 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.55■□□□□ 0.72
COL1A1P02452 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A1P02452 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A1P02452 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A1P02452 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A1P02452 AZGP1P1-201ENST00000411909 902 ntBASIC19.54■□□□□ 0.72
COL1A1P02452 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.54■□□□□ 0.72
COL1A1P02452 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A1P02452 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.54■□□□□ 0.72
COL1A1P02452 AC245100.5-201ENST00000452108 331 ntBASIC19.54■□□□□ 0.72
COL1A1P02452 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.54■□□□□ 0.72
COL1A1P02452 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.54■□□□□ 0.72
COL1A1P02452 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.54■□□□□ 0.72
COL1A1P02452 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.54■□□□□ 0.72
COL1A1P02452 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
COL1A1P02452 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A1P02452 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.54■□□□□ 0.72
COL1A1P02452 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A1P02452 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A1P02452 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
COL1A1P02452 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A1P02452 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A1P02452 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.54■□□□□ 0.72
COL1A1P02452 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A1P02452 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.54■□□□□ 0.72
COL1A1P02452 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
COL1A1P02452 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A1P02452 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A1P02452 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
COL1A1P02452 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.54■□□□□ 0.72
COL1A1P02452 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.54■□□□□ 0.72
COL1A1P02452 SPDYE19P-201ENST00000338590 713 ntBASIC19.54■□□□□ 0.72
COL1A1P02452 AC022494.1-201ENST00000466044 728 ntBASIC19.54■□□□□ 0.72
COL1A1P02452 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC19.54■□□□□ 0.72
COL1A1P02452 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.54■□□□□ 0.72
COL1A1P02452 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.54■□□□□ 0.72
COL1A1P02452 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A1P02452 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A1P02452 SRD5A3P1-201ENST00000603021 949 ntBASIC19.54■□□□□ 0.72
COL1A1P02452 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.54■□□□□ 0.72
COL1A1P02452 AC099568.2-201ENST00000609194 695 ntBASIC19.54■□□□□ 0.72
COL1A1P02452 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.54■□□□□ 0.72
COL1A1P02452 MIR6805-201ENST00000615055 62 ntBASIC19.54■□□□□ 0.72
COL1A1P02452 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.54■□□□□ 0.72
COL1A1P02452 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A1P02452 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A1P02452 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.54■□□□□ 0.72
COL1A1P02452 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL1A1P02452 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.53■□□□□ 0.72
COL1A1P02452 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.53■□□□□ 0.72
COL1A1P02452 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL1A1P02452 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL1A1P02452 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL1A1P02452 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
COL1A1P02452 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
COL1A1P02452 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL1A1P02452 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL1A1P02452 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
COL1A1P02452 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
COL1A1P02452 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL1A1P02452 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
COL1A1P02452 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL1A1P02452 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL1A1P02452 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.53■□□□□ 0.72
COL1A1P02452 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL1A1P02452 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.53■□□□□ 0.72
COL1A1P02452 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms