Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TRBV12-3P01733 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV12-3P01733 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV12-3P01733 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV12-3P01733 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
TRBV12-3P01733 LINC01144-201ENST00000626198 1710 ntBASIC12.71□□□□□ -0.37
TRBV12-3P01733 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.71□□□□□ -0.37
TRBV12-3P01733 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TRBV12-3P01733 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV12-3P01733 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV12-3P01733 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV12-3P01733 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12.71□□□□□ -0.37
TRBV12-3P01733 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV12-3P01733 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
TRBV12-3P01733 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV12-3P01733 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.71□□□□□ -0.37
TRBV12-3P01733 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.71□□□□□ -0.37
TRBV12-3P01733 SPCS2P4-201ENST00000436160 681 ntBASIC12.71□□□□□ -0.37
TRBV12-3P01733 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.71□□□□□ -0.37
TRBV12-3P01733 AC004967.1-201ENST00000453589 447 ntBASIC12.71□□□□□ -0.37
TRBV12-3P01733 RN7SL589P-201ENST00000481268 310 ntBASIC12.71□□□□□ -0.37
TRBV12-3P01733 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
TRBV12-3P01733 FAM86C2P-203ENST00000528684 1004 ntBASIC12.71□□□□□ -0.37
TRBV12-3P01733 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.71□□□□□ -0.37
TRBV12-3P01733 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.71□□□□□ -0.37
TRBV12-3P01733 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.71□□□□□ -0.37
TRBV12-3P01733 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV12-3P01733 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.71□□□□□ -0.37
TRBV12-3P01733 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.71□□□□□ -0.37
TRBV12-3P01733 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.71□□□□□ -0.37
TRBV12-3P01733 AC022145.2-201ENST00000598203 171 ntBASIC12.71□□□□□ -0.37
TRBV12-3P01733 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.71□□□□□ -0.37
TRBV12-3P01733 AL596442.2-201ENST00000610240 980 ntBASIC12.71□□□□□ -0.37
TRBV12-3P01733 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.71□□□□□ -0.37
TRBV12-3P01733 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
TRBV12-3P01733 AC105339.1-204ENST00000636249 355 ntBASIC12.71□□□□□ -0.37
TRBV12-3P01733 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC12.71□□□□□ -0.37
TRBV12-3P01733 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
TRBV12-3P01733 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
TRBV12-3P01733 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.71□□□□□ -0.37
TRBV12-3P01733 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRBV12-3P01733 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
TRBV12-3P01733 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
TRBV12-3P01733 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRBV12-3P01733 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.38
TRBV12-3P01733 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRBV12-3P01733 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
TRBV12-3P01733 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRBV12-3P01733 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRBV12-3P01733 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRBV12-3P01733 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
TRBV12-3P01733 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.38
TRBV12-3P01733 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRBV12-3P01733 AC005622.1-201ENST00000636801 1703 ntBASIC12.71□□□□□ -0.38
TRBV12-3P01733 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
TRBV12-3P01733 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
TRBV12-3P01733 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC12.71□□□□□ -0.38
TRBV12-3P01733 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV12-3P01733 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV12-3P01733 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV12-3P01733 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV12-3P01733 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV12-3P01733 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV12-3P01733 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 AC006449.5-201ENST00000610658 2098 ntBASIC12.7□□□□□ -0.38
TRBV12-3P01733 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRBV12-3P01733 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC12.7□□□□□ -0.38
TRBV12-3P01733 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TRBV12-3P01733 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms