Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ZBED1O96006 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ZBED1O96006 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZBED1O96006 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZBED1O96006 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZBED1O96006 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZBED1O96006 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ZBED1O96006 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZBED1O96006 AC004461.1-201ENST00000412461 403 ntBASIC17.4■□□□□ 0.38
ZBED1O96006 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZBED1O96006 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZBED1O96006 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.4■□□□□ 0.38
ZBED1O96006 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.4■□□□□ 0.38
ZBED1O96006 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.4■□□□□ 0.38
ZBED1O96006 AP001160.2-201ENST00000596071 487 ntBASIC17.4■□□□□ 0.38
ZBED1O96006 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZBED1O96006 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.4■□□□□ 0.38
ZBED1O96006 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ZBED1O96006 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.4■□□□□ 0.38
ZBED1O96006 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZBED1O96006 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZBED1O96006 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZBED1O96006 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZBED1O96006 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZBED1O96006 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.39■□□□□ 0.38
ZBED1O96006 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ZBED1O96006 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.39■□□□□ 0.38
ZBED1O96006 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.39■□□□□ 0.38
ZBED1O96006 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZBED1O96006 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZBED1O96006 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZBED1O96006 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZBED1O96006 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.39■□□□□ 0.37
ZBED1O96006 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZBED1O96006 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ZBED1O96006 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.39■□□□□ 0.37
ZBED1O96006 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZBED1O96006 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZBED1O96006 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZBED1O96006 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.39■□□□□ 0.37
ZBED1O96006 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
ZBED1O96006 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
ZBED1O96006 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.39■□□□□ 0.37
ZBED1O96006 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.39■□□□□ 0.37
ZBED1O96006 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZBED1O96006 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.39■□□□□ 0.37
ZBED1O96006 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.39■□□□□ 0.37
ZBED1O96006 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.39■□□□□ 0.37
ZBED1O96006 CNN2P11-201ENST00000429351 262 ntBASIC17.39■□□□□ 0.37
ZBED1O96006 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.39■□□□□ 0.37
ZBED1O96006 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
ZBED1O96006 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.39■□□□□ 0.37
ZBED1O96006 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.39■□□□□ 0.37
ZBED1O96006 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.39■□□□□ 0.37
ZBED1O96006 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.39■□□□□ 0.37
ZBED1O96006 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ZBED1O96006 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ZBED1O96006 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.39■□□□□ 0.37
ZBED1O96006 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.39■□□□□ 0.37
ZBED1O96006 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.39■□□□□ 0.37
ZBED1O96006 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ZBED1O96006 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZBED1O96006 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ZBED1O96006 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.39■□□□□ 0.37
ZBED1O96006 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.39■□□□□ 0.37
ZBED1O96006 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZBED1O96006 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
ZBED1O96006 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.39■□□□□ 0.37
ZBED1O96006 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ZBED1O96006 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZBED1O96006 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.39■□□□□ 0.37
ZBED1O96006 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZBED1O96006 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZBED1O96006 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZBED1O96006 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.39■□□□□ 0.37
ZBED1O96006 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZBED1O96006 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.39■□□□□ 0.37
ZBED1O96006 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZBED1O96006 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZBED1O96006 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ZBED1O96006 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZBED1O96006 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZBED1O96006 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.38■□□□□ 0.37
ZBED1O96006 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.38■□□□□ 0.37
ZBED1O96006 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZBED1O96006 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZBED1O96006 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZBED1O96006 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ZBED1O96006 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZBED1O96006 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ZBED1O96006 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZBED1O96006 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZBED1O96006 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZBED1O96006 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ZBED1O96006 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.38■□□□□ 0.37
ZBED1O96006 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ZBED1O96006 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ZBED1O96006 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.38■□□□□ 0.37
ZBED1O96006 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.38■□□□□ 0.37
ZBED1O96006 AC004835.2-201ENST00000603762 682 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms