Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN3O95197 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN3O95197 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RTN3O95197 AL603756.1-201ENST00000606511 2163 ntBASIC17.35■□□□□ 0.37
RTN3O95197 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN3O95197 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTN3O95197 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RTN3O95197 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTN3O95197 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RTN3O95197 SPDYE7P-202ENST00000420373 878 ntBASIC17.35■□□□□ 0.37
RTN3O95197 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.35■□□□□ 0.37
RTN3O95197 CNN2P2-201ENST00000443536 909 ntBASIC17.35■□□□□ 0.37
RTN3O95197 FAM86GP-201ENST00000448322 971 ntBASIC17.35■□□□□ 0.37
RTN3O95197 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.35■□□□□ 0.37
RTN3O95197 CNN2P3-201ENST00000450201 906 ntBASIC17.35■□□□□ 0.37
RTN3O95197 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.35■□□□□ 0.37
RTN3O95197 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.35■□□□□ 0.37
RTN3O95197 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.35■□□□□ 0.37
RTN3O95197 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN3O95197 ALG1L8P-201ENST00000533887 760 ntBASIC17.35■□□□□ 0.37
RTN3O95197 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.35■□□□□ 0.37
RTN3O95197 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN3O95197 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN3O95197 AC106028.4-201ENST00000614509 607 ntBASIC17.35■□□□□ 0.37
RTN3O95197 AL136317.3-201ENST00000618497 906 ntBASIC17.35■□□□□ 0.37
RTN3O95197 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
RTN3O95197 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.35■□□□□ 0.37
RTN3O95197 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN3O95197 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.35■□□□□ 0.37
RTN3O95197 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTN3O95197 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN3O95197 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.35■□□□□ 0.37
RTN3O95197 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN3O95197 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN3O95197 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.35■□□□□ 0.37
RTN3O95197 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTN3O95197 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.35■□□□□ 0.37
RTN3O95197 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN3O95197 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RTN3O95197 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 AL662844.4-201ENST00000606367 2838 ntBASIC17.34■□□□□ 0.37
RTN3O95197 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.34■□□□□ 0.37
RTN3O95197 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RTN3O95197 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RTN3O95197 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.34■□□□□ 0.37
RTN3O95197 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.34■□□□□ 0.37
RTN3O95197 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.34■□□□□ 0.37
RTN3O95197 AC142381.1-201ENST00000426099 345 ntBASIC17.34■□□□□ 0.37
RTN3O95197 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.34■□□□□ 0.37
RTN3O95197 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.34■□□□□ 0.37
RTN3O95197 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RTN3O95197 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RTN3O95197 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.34■□□□□ 0.37
RTN3O95197 AC069262.1-201ENST00000539058 672 ntBASIC17.34■□□□□ 0.37
RTN3O95197 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.34■□□□□ 0.37
RTN3O95197 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.34■□□□□ 0.37
RTN3O95197 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.34■□□□□ 0.37
RTN3O95197 AC026150.2-201ENST00000564693 1156 ntBASIC17.34■□□□□ 0.37
RTN3O95197 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.34■□□□□ 0.37
RTN3O95197 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.34■□□□□ 0.37
RTN3O95197 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.34■□□□□ 0.37
RTN3O95197 AL355385.1-201ENST00000606123 409 ntBASIC17.34■□□□□ 0.37
RTN3O95197 GPAA1P2-202ENST00000606848 1787 ntBASIC17.34■□□□□ 0.37
RTN3O95197 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.34■□□□□ 0.37
RTN3O95197 AC073439.1-201ENST00000624121 1774 ntBASIC17.34■□□□□ 0.37
RTN3O95197 Z92544.3-201ENST00000624747 417 ntBASIC17.34■□□□□ 0.37
RTN3O95197 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.34■□□□□ 0.37
RTN3O95197 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RTN3O95197 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN3O95197 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.37
RTN3O95197 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
RTN3O95197 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
RTN3O95197 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RTN3O95197 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTN3O95197 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTN3O95197 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTN3O95197 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RTN3O95197 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTN3O95197 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms