Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.76■□□□□ 0.11
GFRA3O60609 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GFRA3O60609 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFRA3O60609 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFRA3O60609 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFRA3O60609 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFRA3O60609 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFRA3O60609 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFRA3O60609 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFRA3O60609 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.76■□□□□ 0.11
GFRA3O60609 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
GFRA3O60609 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFRA3O60609 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFRA3O60609 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFRA3O60609 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
GFRA3O60609 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.76■□□□□ 0.11
GFRA3O60609 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.76■□□□□ 0.11
GFRA3O60609 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GFRA3O60609 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.76■□□□□ 0.11
GFRA3O60609 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC15.76■□□□□ 0.11
GFRA3O60609 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.76■□□□□ 0.11
GFRA3O60609 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
GFRA3O60609 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
GFRA3O60609 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.76■□□□□ 0.11
GFRA3O60609 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFRA3O60609 AC009084.3-201ENST00000623356 437 ntBASIC15.76■□□□□ 0.11
GFRA3O60609 KRT18P55-202ENST00000578578 1546 ntBASIC15.76■□□□□ 0.11
GFRA3O60609 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
GFRA3O60609 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.76■□□□□ 0.11
GFRA3O60609 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.76■□□□□ 0.11
GFRA3O60609 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.76■□□□□ 0.11
GFRA3O60609 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.76■□□□□ 0.11
GFRA3O60609 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFRA3O60609 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
GFRA3O60609 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFRA3O60609 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFRA3O60609 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
GFRA3O60609 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GFRA3O60609 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFRA3O60609 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.76■□□□□ 0.11
GFRA3O60609 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.75■□□□□ 0.11
GFRA3O60609 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GFRA3O60609 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GFRA3O60609 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GFRA3O60609 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GFRA3O60609 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GFRA3O60609 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GFRA3O60609 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
GFRA3O60609 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.75■□□□□ 0.11
GFRA3O60609 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.75■□□□□ 0.11
GFRA3O60609 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GFRA3O60609 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GFRA3O60609 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.75■□□□□ 0.11
GFRA3O60609 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.75■□□□□ 0.11
GFRA3O60609 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.75■□□□□ 0.11
GFRA3O60609 AC016700.1-201ENST00000429424 312 ntBASIC15.75■□□□□ 0.11
GFRA3O60609 POM121L10P-201ENST00000436994 1285 ntBASIC15.75■□□□□ 0.11
GFRA3O60609 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GFRA3O60609 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.75■□□□□ 0.11
GFRA3O60609 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.75■□□□□ 0.11
GFRA3O60609 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GFRA3O60609 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.75■□□□□ 0.11
GFRA3O60609 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GFRA3O60609 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.75■□□□□ 0.11
GFRA3O60609 AP000346.4-201ENST00000614827 381 ntBASIC15.75■□□□□ 0.11
GFRA3O60609 COX6A1P2-201ENST00000620597 330 ntBASIC15.75■□□□□ 0.11
GFRA3O60609 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.75■□□□□ 0.11
GFRA3O60609 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
GFRA3O60609 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.75■□□□□ 0.11
GFRA3O60609 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
GFRA3O60609 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GFRA3O60609 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
GFRA3O60609 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.74■□□□□ 0.11
GFRA3O60609 AC093503.3-201ENST00000624917 2352 ntBASIC15.74■□□□□ 0.11
GFRA3O60609 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.74■□□□□ 0.11
GFRA3O60609 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.74■□□□□ 0.11
GFRA3O60609 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.74■□□□□ 0.11
GFRA3O60609 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.74■□□□□ 0.11
GFRA3O60609 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
GFRA3O60609 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.74■□□□□ 0.11
GFRA3O60609 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.74■□□□□ 0.11
GFRA3O60609 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.74■□□□□ 0.11
GFRA3O60609 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GFRA3O60609 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.74■□□□□ 0.11
GFRA3O60609 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.74■□□□□ 0.11
GFRA3O60609 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.74■□□□□ 0.11
GFRA3O60609 AP001527.2-201ENST00000614441 631 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms