Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.18□□□□□ -0.14
LYRM1O43325 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
LYRM1O43325 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.18□□□□□ -0.14
LYRM1O43325 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.18□□□□□ -0.14
LYRM1O43325 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.18□□□□□ -0.14
LYRM1O43325 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LYRM1O43325 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYRM1O43325 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYRM1O43325 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYRM1O43325 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYRM1O43325 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LYRM1O43325 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.18□□□□□ -0.14
LYRM1O43325 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYRM1O43325 AC005840.4-201ENST00000541242 2494 ntBASIC14.18□□□□□ -0.14
LYRM1O43325 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.18□□□□□ -0.14
LYRM1O43325 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYRM1O43325 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LYRM1O43325 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYRM1O43325 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 AC013726.1-201ENST00000563747 2285 ntBASIC14.17□□□□□ -0.14
LYRM1O43325 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.17□□□□□ -0.14
LYRM1O43325 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LYRM1O43325 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LYRM1O43325 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 AL391807.1-203ENST00000604392 2365 ntBASIC14.17□□□□□ -0.14
LYRM1O43325 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.17□□□□□ -0.14
LYRM1O43325 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.17□□□□□ -0.14
LYRM1O43325 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LYRM1O43325 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.17□□□□□ -0.14
LYRM1O43325 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.17□□□□□ -0.14
LYRM1O43325 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.17□□□□□ -0.14
LYRM1O43325 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.17□□□□□ -0.14
LYRM1O43325 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 AC092666.2-201ENST00000613287 246 ntBASIC14.17□□□□□ -0.14
LYRM1O43325 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.17□□□□□ -0.14
LYRM1O43325 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LYRM1O43325 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.17□□□□□ -0.14
LYRM1O43325 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LYRM1O43325 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYRM1O43325 SNX33P1-201ENST00000592116 1762 ntBASIC14.17□□□□□ -0.14
LYRM1O43325 PCGF3-213ENST00000620529 1899 ntBASIC14.16□□□□□ -0.14
LYRM1O43325 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.16□□□□□ -0.14
LYRM1O43325 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
LYRM1O43325 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM1O43325 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
LYRM1O43325 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.16□□□□□ -0.14
LYRM1O43325 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM1O43325 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM1O43325 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM1O43325 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.16□□□□□ -0.14
LYRM1O43325 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM1O43325 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
LYRM1O43325 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.16□□□□□ -0.14
LYRM1O43325 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
LYRM1O43325 LINC01144-201ENST00000626198 1710 ntBASIC14.16□□□□□ -0.14
LYRM1O43325 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM1O43325 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM1O43325 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LYRM1O43325 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM1O43325 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LYRM1O43325 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM1O43325 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM1O43325 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LYRM1O43325 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM1O43325 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM1O43325 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.16□□□□□ -0.14
LYRM1O43325 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM1O43325 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM1O43325 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.16□□□□□ -0.14
LYRM1O43325 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYRM1O43325 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.16□□□□□ -0.14
LYRM1O43325 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.16□□□□□ -0.14
LYRM1O43325 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LYRM1O43325 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.16□□□□□ -0.14
LYRM1O43325 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms