Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AC004790.2-201ENST00000623588 572 ntBASIC14.3□□□□□ -0.12
PHF1O43189 AL035252.4-201ENST00000624174 288 ntBASIC14.3□□□□□ -0.12
PHF1O43189 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PHF1O43189 AL805961.1-202ENST00000641562 540 ntBASIC14.3□□□□□ -0.12
PHF1O43189 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHF1O43189 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHF1O43189 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
PHF1O43189 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHF1O43189 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.3□□□□□ -0.12
PHF1O43189 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHF1O43189 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
PHF1O43189 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PHF1O43189 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHF1O43189 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHF1O43189 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHF1O43189 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.3□□□□□ -0.12
PHF1O43189 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.3□□□□□ -0.12
PHF1O43189 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHF1O43189 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.3□□□□□ -0.12
PHF1O43189 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PHF1O43189 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PHF1O43189 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHF1O43189 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
PHF1O43189 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PHF1O43189 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHF1O43189 PI4KAP1-204ENST00000612579 1703 ntBASIC14.29□□□□□ -0.12
PHF1O43189 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PHF1O43189 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PHF1O43189 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.29□□□□□ -0.12
PHF1O43189 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
PHF1O43189 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
PHF1O43189 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PHF1O43189 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.29□□□□□ -0.12
PHF1O43189 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.29□□□□□ -0.12
PHF1O43189 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.29□□□□□ -0.12
PHF1O43189 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 IGHV3-65-201ENST00000523210 341 ntBASIC14.29□□□□□ -0.12
PHF1O43189 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.29□□□□□ -0.12
PHF1O43189 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.29□□□□□ -0.12
PHF1O43189 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.29□□□□□ -0.12
PHF1O43189 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.29□□□□□ -0.12
PHF1O43189 AC124947.2-201ENST00000547118 1133 ntBASIC14.29□□□□□ -0.12
PHF1O43189 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PHF1O43189 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.29□□□□□ -0.12
PHF1O43189 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PHF1O43189 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.29□□□□□ -0.12
PHF1O43189 AC018845.2-201ENST00000568326 409 ntBASIC14.29□□□□□ -0.12
PHF1O43189 MIR4745-201ENST00000577608 62 ntBASIC14.29□□□□□ -0.12
PHF1O43189 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.29□□□□□ -0.12
PHF1O43189 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PHF1O43189 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PHF1O43189 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PHF1O43189 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.29□□□□□ -0.12
PHF1O43189 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.29□□□□□ -0.12
PHF1O43189 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHF1O43189 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PHF1O43189 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF1O43189 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.28□□□□□ -0.12
PHF1O43189 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.28□□□□□ -0.12
PHF1O43189 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF1O43189 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF1O43189 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF1O43189 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF1O43189 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF1O43189 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.28□□□□□ -0.12
PHF1O43189 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PHF1O43189 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF1O43189 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF1O43189 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PHF1O43189 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.28□□□□□ -0.12
PHF1O43189 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PHF1O43189 AP002414.1-201ENST00000391405 1147 ntBASIC14.28□□□□□ -0.12
PHF1O43189 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF1O43189 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PHF1O43189 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHF1O43189 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.28□□□□□ -0.12
PHF1O43189 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.28□□□□□ -0.12
PHF1O43189 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms